Garra rufa (doctor fish): 141291242
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Entry
141291242 CDS
T11039
Symbol
nfascb
Name
(RefSeq) neurofascin
KO
K06757
neurofascin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
141291242 (nfascb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
grf04515
]
141291242 (nfascb)
Cell adhesion molecules [BR:
grf04515
]
Immunoglobulin superfamily
L1 family
141291242 (nfascb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
A9CJY8-like_N
Syndecan
Herpes_gE_N
DUF3792
Motif
Other DBs
NCBI-GeneID:
141291242
NCBI-ProteinID:
XP_073679514
LinkDB
All DBs
Position
18:18486376..18509063
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AA seq
1179 aa
AA seq
DB search
MLYKAEMRALKCWRIPAILTILQQTWILAMEIPPDVRQPPMIYKESPQDYIVDPVDPIIV
ECEATGNPPPVFTWTRNGVYLNVARDPQVSMRWRSGTLEIFFWGRPNDYEGVYQCTATNE
FGSALSSFINLRVSKARTWLKEYLEPVSVVVGLPLILPCNPPVGPPKPDTYWLNSTMAPI
RQDRRVSKSENGDLYFSSIVAEDALTNYVCVARFPFTNTIQQKPPLILQVLTARMAAHTP
PKFLKPKGTVSTTIAMLGEELILECFAAGVPTPFIKWTKDWEEMSMTGKKLENFNKTLRI
RNVSMDDGGDYICTASNRMGSLDHIITVRVKSVPFWVEKPESLVLSRDDSGSIVCRADGI
PRPQIQWLVNGEPISDAPKSPGRQVAGDTLTFRAVVPDSVAVFQCNASNQYGYIMTNAFL
AVMDMKPRLLGPREELIKTTEGNTTLLDCPYFGSPKPDLRWSKGGLGTLEGGRHRILPNG
TLEIRNTKLQDQGSYVCVASNVIGRDDKEVQLEVKEPIKIIRAPHNTVVVRGSLARFDCK
IKFDPTLDVTVTWLKDKKFLILGRRMTKDEDSLSIADVYRRDEGVYTCRVKSELEDVTAS
AKLTVMDRPDPPSDLEISDPSERSVRLTWVPGLSNHSPIKEYLVQYTEDLLADYWLLPSG
WKNLSSYPGNLNSVILQLTPFVEYRFRVIAVNGIGPSKPSWASEYYQTGGAVPDAIPRNI
QGMGSGVFRNNMEISWEPLEYREWNGPKLGYMVWWRRRDSREEWKNYTTYWWCSYIIYDT
DTFTPYEIKVQAVNFFGYGPESPVVIGYSGEDRPVAAPTDLSVSDIESTTLTVHWEPVAR
VDMMGEIKEYKVYYWRESSRLPWHTVSRRIKTKSFKANGPRLSGTLSGLVPYSNYRMYIV
VANNRYEGPPSNTIEFQTPEGVPTIPRSFRIMHRHYDTIYLDWEEPAEPNGILTGYILKY
QTLNITLGDRIQVEYIPPNITYFSLRRFDRYTRYKFSLAAQTEVGVGEAFTEESPHFTTE
EHTRDQVDIVTQGWFIGLMCAVALLVLIMLIVFFIKRSRGGKYPVRDKKDFALEPMDDRE
NGTFDYRSLERITRVPTMPYSRREEESRQGRSQGAIEHIGRRTNSDDSLMEYGESEEIEF
NEDGSFIGEYTGVSKRNIDRSPYHDSSEPTSPVAIYSFA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacaaggcagagatgagagctctgaagtgttggaggattcctgccatacttact
atcctacagcaaacatggattttagccatggaaattcctcctgatgtcaggcagcctcca
atgatatataaagagagccctcaagactacatagtagatccggttgaccctattatagtg
gagtgtgaagcaacagggaatccacctccagtgttcacatggacacgtaatggagtgtac
ctaaatgtggctcgagatcctcaggtcagcatgaggtggcgttctggcacattagagatt
ttcttctggggtcgtcccaatgactacgagggtgtctatcagtgcacagcgacaaatgag
tttggctctgctctgtcaagtttcatcaatcttcgtgtgtccaaggcccgtacgtggttg
aaggagtatctggagccagtctcagtggtggttggacttcctctcatccttccctgcaat
cctcctgtaggtcctccaaaacctgacacttactggctgaacagtactatggcaccaatc
cgtcaggatcgtcgagtatcaaagtcagagaatggagatctatacttttccagtattgta
gcagaagacgctcttacaaactatgtctgtgtcgcccggtttcccttcacgaacaccatc
cagcagaaaccgccgctcatcctgcaggtgctcacagctcgcatggcagcccacacgcca
cccaagtttctgaaacccaaaggaactgtcagcacaactattgcgatgctaggggaagaa
ctcattttggagtgttttgctgctggagttccgactcccttcatcaagtggactaaagat
tgggaggagatgtccatgacaggaaagaagttggagaactttaataagacacttagaata
aggaacgtctctatggatgatggaggagactacatctgcactgcttcaaacaggatgggc
agcctggaccacatcatcactgtcagggtcaaatcggttccgttctgggtggagaagcct
gagagtctggtcttgtctcgtgatgacagtggtagtatagtgtgtagagctgatggaatt
cctcgaccccagatacagtggctggttaatggagagccaatcagtgatgctcctaagagt
ccaggcagacaggttgcaggagacactttgacattcagggctgtggttccagacagcgta
gcagtgttccagtgcaatgcttcaaaccagtacggctatatcatgacaaacgcttttttg
gctgtaatggatatgaaacctcgtctgttaggtcccagagaggaactaattaaaacaaca
gaaggcaatactactcttttagactgcccatattttggctctcccaaacctgacctgcgg
tggtcaaaaggaggactaggaaccttagaagggggtcgtcataggattcttccaaatggt
acactggaaatcagaaacacaaaactacaagatcaaggaagttatgtgtgtgtcgcaagc
aacgtcattggacgagatgacaaggaggtccaactagaggtcaaagagcccattaaaatc
atccgtgctccacacaacactgtagtcgtaagaggaagcctggctcgctttgattgtaag
attaaattcgacccgactctggatgtcacagtcacttggcttaaggacaagaagttcttg
atcttaggaagaaggatgaccaaggatgaggattctctgagcattgctgatgtgtacaga
agagatgaaggcgtctacacatgcagggttaaaagtgaactggaagatgtcactgcctca
gccaaactcactgtgatggatcgtccagacccgcccagtgacctagagatatcagaccca
tcagagaggagcgttagactcacctgggtacctgggctgagcaaccacagtcctattaaa
gagtacctggttcaatatacagaagatctccttgcagattattggctgctgccaagtggc
tggaagaacctttccagctacccggggaacctaaactctgtcattttacagctgacacca
tttgtcgagtacagattccgagtcatcgctgtaaacgggataggtcccagtaaacccagc
tgggcatctgaatactaccagactggtggagctgtgcctgatgccatcccaagaaacatc
caaggaatgggaagtggagtgttcagaaataacatggaaatcagctgggagccactggaa
tacagagaatggaatgggccaaaactgggctacatggtttggtggagacgaagggattca
agagaggaatggaaaaactacacaacatactggtggtgtagctacatcatctatgacact
gacaccttcacaccctatgagattaaagttcaggctgtcaacttctttggctatggccca
gaatcccctgttgtgattggctactcaggggaggaccgtcctgttgcagctccaactgac
ctgagtgtgtcagacattgagagcacaacgctgacagtccattgggagccagtggcacga
gtcgacatgatgggggaaataaaagagtacaaagtttattactggagagagagcagtcgt
ctgccctggcacactgtgagcaggaggattaagacgaagagttttaaagctaatggacct
cgtctgtctgggaccctgagcggccttgtaccatatagtaactacaggatgtatattgta
gtggcaaataaccgttatgagggtccgcccagcaacactattgagtttcagacacctgaa
ggagtgcccacgattcccagatcattcagaatcatgcaccggcactatgacaccatttat
ctggactgggaagaacctgcagaacccaatggcattctgactggatatattctcaaatat
cagacattgaacatcactctgggtgacagaatccaagtggaatacattcctccgaacatc
acctatttctccctgcggcgttttgaccgttacactcgatacaagttctcactggcagca
caaaccgaggttggagtcggggaggcgttcacagaggaatcaccccattttacaactgaa
gaacatacccgcgatcaagtggacattgtgacgcagggttggttcattggcttaatgtgt
gcagttgctctcctcgttcttatcatgctcatcgtctttttcatcaagaggagccgagga
ggaaagtacccagtgcgggacaagaaggactttgcactggagccaatggatgacagagag
aatggaacgtttgattacaggtctcttgagaggataacacgagtgcctacaatgccctat
agcagacgtgaggaagaaagtcgacaaggacgcagtcaaggtgcaattgagcacattggc
aggagaacaaacagtgacgacagcctcatggagtatggtgaaagtgaagagatcgagttt
aacgaggatggctccttcatcggagagtacacaggcgtcagtaagaggaacatcgacagg
agtccgtaccatgacagctctgagcccacatctcctgtggccatctattcttttgcctag
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