Garra rufa (doctor fish): 141291243
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Entry
141291243 CDS
T11039
Name
(RefSeq) acidic mammalian chitinase-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00520
Amino sugar and nucleotide sugar metabolism
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
141291243
Enzymes [BR:
grf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
141291243
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
CBM_14
Motif
Other DBs
NCBI-GeneID:
141291243
NCBI-ProteinID:
XP_073679515
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Position
18:18512014..18516338
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AA seq
481 aa
AA seq
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MMTKFSFLAGFSLALCHFGWASHLGCYFTNWSQYRPDSGKYLPDNVDPHLCTHLFYGFSV
INQTNELTTYEWNDETLYESFNGLKKKNPDLKTLLAVGGWNFGTTQFTIMVSTSENRQTF
IQSSIRFLRKHSFDGLDLDWEYPGSRGSPPEDKQRFTLLCKELLEAYQAETVATGRPRLM
LSAAVAAGKGTIDAGYEIAEIAKYLDFINVMTYDFHGSWESVTGHNSPLYPGSGDKGDSI
YLNTDFAMRYWRDQGAPVEKLRMGFAAYGRTFHLSSAARGVRASASGPGSAGTYTRESGF
WSYYEVCTFLQGATVQWIDDQKVPYATKGQDWVGFDSKESFQTKVNYLKENKFGGAFVWA
LDLDDFTGQFCGQGKYPLIGQLRTLLNIDFPSNTTPALPNTTHEPGKTTTTASTAVSHAT
RPHVVPTAPSEFCAAKTDGVYANPDDPTTFIQCSNTRVFLQNCPAKTVFNPNCLCCDWPK
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccaaattcagttttctagctggcttttccttggcattgtgtcactttggatgg
gcctcccatctcggatgctatttcacaaactggtctcagtacagacctgacagtggcaag
tacctgccagacaatgtggatccacatctgtgcactcatttattttatggtttttccgtt
attaatcagacgaatgagttgaccacttatgagtggaatgatgaaactctctatgaatct
ttcaatggactaaaaaaaaaaaatcctgacttgaaaactctcttggctgtcggaggatgg
aactttggcacaactcagtttactatcatggtgtcaacatcagaaaacaggcagacgttt
attcagtcctccatcagatttctgaggaaacatagctttgatggtctggatctggactgg
gagtatcccggttcccgtggaagtcctccagaagacaagcaaaggttcactctgctctgt
aaggagctcttggaagcttaccaggcagagacagttgccactggacgccccagactcatg
ctctctgctgcagtggctgctgggaaaggaaccattgatgctggttatgaaattgcagaa
attgccaaatatttggacttcattaatgtgatgacctatgacttccatggctcatgggaa
agtgtcaccgggcacaacagtcctctgtaccctggctctggagacaaaggagacagcatc
tacttaaacactgattttgcaatgagatactggcgagatcagggggctcctgtggagaag
ctgaggatggggtttgcagcatatggaagaacatttcacctttcgtctgcagccagaggg
gttagagcttcagctagtggtcctggatcagctggaacatacactagagagtccggattc
tggtcctattatgaggtctgtactttccttcaaggagccactgtacaatggattgatgat
cagaaagttccttatgctaccaagggacaggactgggtgggatttgactccaaggaaagc
tttcagactaaggtgaactacctgaaggagaacaagtttggaggagcttttgtctgggct
ctggatcttgatgactttacaggacagttctgtgggcagggcaaataccctctcattgga
caactacgtacacttctcaatattgatttcccttcaaatacaacacctgcccttccaaat
acaacacatgagcctggtaagaccacaactacagcatctactgctgtatctcatgccaca
agacctcatgttgtcccgacagctccctccgagttctgtgctgccaaaacagatggggta
tatgcaaacccagacgacccgacaaccttcattcagtgttctaataccagggtcttttta
cagaattgccctgcaaagactgtctttaatcccaactgcttgtgctgtgactggcctaag
aattaa
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