Garra rufa (doctor fish): 141291399
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Entry
141291399 CDS
T11039
Symbol
smpd2a
Name
(RefSeq) sphingomyelin phosphodiesterase 2a
KO
K12351
sphingomyelin phosphodiesterase 2 [EC:
3.1.4.12
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00600
Sphingolipid metabolism
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
141291399 (smpd2a)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
141291399 (smpd2a)
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GFIT
Motif
Pfam:
Exo_endo_phos
Claudin_2
Motif
Other DBs
NCBI-GeneID:
141291399
NCBI-ProteinID:
XP_073679671
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Position
18:complement(9299733..9318518)
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AA seq
430 aa
AA seq
DB search
MATERPAKLRVFSLNCWGIRFFSKLCTERYEMIGELLDREQHDIALLQEVWSEQDFLFLK
RKLSSSYPHTHYFKSGVIGSGLAVFSRHRIQDALLHRYSLNGYPYMLRHGDWFGGKAVGL
VIVDVLGLKAHVYVTHLHAEYSRAQDEYLPHRIVQSWELLQFVRHTSCGADLVVLGGDLN
MHPQDLGNRLFRSHTGLRDCYTETDTFDGCEDGHTLIANNHFTKKQDLIPFEKGIRIDYI
LMKGSQRVSMKCESLSTTKGSVADKPFPYSDHEALTAELALLRSEDSRQHALGYTPAVSE
QMDVVTEACAVVKESLCQTKAMRDKAMHLVFGSLLLMLLPLAMAFLPCSCSCSFSTVGLL
GAVCMSLLLSGVLLYLLFTTHIKVLKETEDQMMLTSNDLQTKLTECQPSGSSSPDGSSEL
QPRSPFKREE
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggagcggcccgccaaactgcgcgtcttctctctcaactgctggggaattcga
ttcttcagtaaactctgtacagagcggtatgaaatgatcggagaactgctggaccgagag
cagcacgacatcgccctgttacaggaagtatggagtgaacaagatttcctgttcctgaag
agaaagctgtcctcctcttatcctcatactcactacttcaagagtggggtcattggcagt
gggcttgctgtgttctccagacacaggatccaggacgctctgctccatcggtattctctt
aacggctacccatatatgctgcgccacggcgactggtttggaggcaaagcggttgggttg
gtcattgtagacgttcttggattaaaggcgcacgtctatgttactcatttacatgcagag
tactccagggctcaagatgaatacctgccccacagaatagtgcagtcgtgggaactgctg
cagttcgtccgtcacacgtcctgtggagcagacctggtggttctgggaggagatctgaac
atgcaccctcaggacttgggaaaccgtcttttcagatctcacaccgggctcagagactgc
tatactgaaacagacacgtttgatggctgtgaagacggtcacacgctaatagcaaacaat
cacttcacaaagaagcaagaccttattccttttgagaagggcatcaggattgactacatt
cttatgaagggctctcagagagtgagcatgaaatgcgagtctctgtccaccaccaagggc
tcagtggctgataaaccctttccatattctgaccacgaggctctgactgctgaactggcc
ttgctgcgctcagaggacagcagacagcatgcattaggatacacacctgctgtatcagag
cagatggacgtggtcacagaggcgtgtgcggtggtaaaggaaagtctgtgtcagacgaag
gccatgcgcgacaaagccatgcatctggtgttcggcagtctgctgttaatgctgctgccg
ctggctatggccttcctgccctgctcctgctcctgctccttcagcaccgtcgggcttctg
ggagctgtgtgcatgagcctgctcctctctggagttttgctctacctgctcttcaccaca
cacatcaaagtcctcaaagagactgaagaccagatgatgctgacctcgaatgacctccag
actaaactgacagaatgtcagccatctggatcatcatcccccgacggttcttcagagctc
cagccacggagtccttttaaacgggaggaatga
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