Garra rufa (doctor fish): 141291667
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Entry
141291667 CDS
T11039
Symbol
krt18a.1
Name
(RefSeq) keratin, type I cytoskeletal 18
KO
K07604
type I keratin, acidic
Organism
grf Garra rufa (doctor fish)
Pathway
grf04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
141291667 (krt18a.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141291667 (krt18a.1)
04147 Exosome [BR:
grf04147
]
141291667 (krt18a.1)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
141291667 (krt18a.1)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
141291667 (krt18a.1)
Exosomal proteins of other body fluids (saliva and urine)
141291667 (krt18a.1)
Exosomal proteins of colorectal cancer cells
141291667 (krt18a.1)
Exosomal proteins of melanoma cells
141291667 (krt18a.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
TMF_DNA_bd
DUF4407
Rab11-FIP3
CCDC39
DUF8031
TBCA_PH
GAS
Rod_CreS
FKBP15
Motif
Other DBs
NCBI-GeneID:
141291667
NCBI-ProteinID:
XP_073679922
LinkDB
All DBs
Position
18:complement(4998920..5002720)
Genome browser
AA seq
434 aa
AA seq
DB search
MSLRTSYSVRSSTSQVPVSQMSQMSIKRTTNVPTYRAASIYGGAGGQGTRISSASYSGVR
SGMGLPSMSSSIQVSASGSTGEIMGNEKMAMQNLNDRLASYLEKVRTLEQANSKLELKIR
EALENRGPDVHDYSRFQPIVDDLRKKIFDATSNNARLVLQIDNARLAADDFRVKYESELS
IRQGVEADIAGLRKVIDDTNLNRMNLESEIEALKEELIFLKKNHDNEVMELHNQISQSGV
QVDVDAPKGQDLSLIMEEIRAKYEKMALKNQEELKAWHESQISEVQVQVSQNTEALQGAR
TEVNDLRRQIQTLEIELDSQKNLKGSLEATLRDTEMRYNMEIESLNAAVQQLEAELTQLR
NNIQQQTQEYEFLLNIKMKLEAEIATYRRLLDGGDFKLQDALEEQKKVKVMTVTQTLVDG
KVVSSSTETKERKL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgagaacaagctacagtgtgcgttcatccacctcccaggtgccggtgtcccag
atgtcccagatgtccatcaagcgtaccaccaacgtgccgacttaccgggccgcgagcatc
tacggtggcgctggaggtcagggaacccgaatctcctctgcctcctactcaggtgtccgc
agtggcatgggacttccctcaatgtccagctccatccaagtgagtgcctccggatccaca
ggtgagatcatgggcaatgagaagatggccatgcagaacctgaatgaccgtctggcctcc
tatctggagaaagtgaggaccctggagcaggccaacagcaagctggagctgaagatccgt
gaggccctggagaatagaggccctgatgtacacgactacagccgcttccagcccatcgtt
gatgatctgcgcaagaagatctttgatgccacctccaacaacgcccgtctagtgctccag
attgataacgcccgcctggcagctgatgacttcagagtcaagtatgaatctgagctgtcc
atccgccaaggtgtggaggctgacattgccggcctgagaaaggtcattgatgacaccaac
ctgaaccgcatgaaccttgaaagtgagattgaggccctcaaggaagagctcatcttcctt
aagaagaaccatgacaatgaggtaatggagcttcataaccagatctcccagtcaggagtg
caggtggatgttgatgctcctaagggacaggatctgtccctgatcatggaggagataaga
gccaagtacgagaagatggctctgaagaaccaggaggagctgaaggcctggcacgaatct
cagatctcagaggttcaggtacaagtctcgcagaacacagaggccctccaaggtgcacgt
acagaagtcaatgatcttcgcagacagattcagacgctggagatcgagttggactcacag
aagaacctgaaaggatcactggaggccactctgcgggacacagaaatgcgctacaacatg
gagatcgagagtctcaatgctgctgtccagcagctggaggctgagctgacacaactgcgc
aacaacatccagcaacagacacaggagtacgagtttctgctgaacatcaagatgaagctg
gaggcagaaattgccacctacaggaggcttctggacggcggagacttcaagctccaggat
gctcttgaggagcagaagaaggtgaaagtgatgacggtcacgcagacgctggtggatgga
aaagtggtgtcctcaagcacagaaaccaaggagaggaaactttga
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