Garra rufa (doctor fish): 141291983
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Entry
141291983 CDS
T11039
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141291983
Ion channels [BR:
grf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
141291983
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRCC1_N
Ion_trans
TRP_2
PKD_channel
Ank_2
zf-C2HC_2
Zn-C2H2_12
Motif
Other DBs
NCBI-GeneID:
141291983
NCBI-ProteinID:
XP_073680068
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All DBs
Position
19:complement(17353295..17372427)
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AA seq
1444 aa
AA seq
DB search
MAPIKIKHIVSFTSQDSKNGVNNLCDGSDSSRPWLCSVQDRSGVLRVELQMERVSAIGFI
DVGNCGSAFIQIDVGRSSWSLDHPYVTLLPTATLMSPVDSKQGIGRQNVRMFKKADFIPQ
AAEESWDRLRVTCTQPFNKRSQFGLSFLRIRTMEDEAEDSPDIAPENLRTPEKMTSVMEW
LSSPAIQNTFFGRITGAVSSDAQRNPGSLSRAERMVKAAHSNRRSLSTSPSSTTSSTTPQ
REDNVKTPPGGLRTSSDRKKTPQEQRKKSKARQSLINSGTPRKRSRPTTSTHKPSSTSPH
RSTQQAPQDSPETRCPLCGESFSPDYLPFHASTCLDSGSAELMGLREETEVVSSRHSSVF
GSGADEHMVPCPLCSFRFPPDRIQQHASTCGDTLEPSTPMMENLTPEQWREIVNKKFRFP
PELLGAIREGNVNMVSSLLKTGDGIIRQLDDSEDRLWREALNLSIRLGNEDTMDTLLHGV
KFDFRQIHESLLVAVDTNQPRVVKRLLDRLDLEKGNKMDVRSFSMAIFDHSIDDSQFAPG
VTPLTLACQKDLYDIVTMLNQKGHEIPWPHKISCVCLECRNGRQYDLLKFSLSRINTYRG
IASRAYLSITAEDAMLTAFRLSRDLRKLSKKEPEFKPQYIALEQLCQEFAVELLGMCRNQ
SEVTTILNSLGDKDEDSEDELDQQAFEEGIPNLARLRLAVNYNQKQFVAHPICQQVLSSI
WCGNLSGWRGSRTAWKLLVSFGIFLTMPFLCLIYWIAPKSKLGKTLKIPVIKFLLHSASY
MWFLITLLGESIAMEVYRDSFASRQHTILHSSFHMVWVVGFFWFECKEIWIEGLRSYFLD
WWNCLDVMVLSMYLASFALRLVILLKVHFICQLPEKEDECVYFTETMRNEWHQEDPQFIA
EVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFMFILVIIGTAFLCGVNNI
YVPYMISPNLGRLNETFSFLFWTMFGMADQTYVDMPDFVLAEFVGRILYGIYTLIIVIVL
LNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPVPFNIIPSPKAVFYLLRG
IVRRICCCCFNCNSDSDYPPLASMKDDMGAGENRIPYRQQVIRALVQRYIESARREFEES
KRKDVGNRITELSKVIVQLHAEMKRIQTSMIGHSDNPKGDPSEGSSFLGKYIVGAKNNFK
GFNSDERNTVPLHEPILHEEPAEETVKEKDEETADVQESPTADTEPDRKANEEQNSEGEI
DNALEDKNETEGGEETGNDDVTEISMDEEKEEEAENDTETGNTSETVIDIESNADAESEA
SGENEDETIAEEATDNVDELNTDEETGGTDLNEAETEENGEVEESSGTTEDEVVVEVINE
NAGEGIKIDLNQSSLVSFLAKRIEEKLERNFSFIGNQLSSPTGSDDSQDTGFGSQEFDLS
TSSP
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggctcccatcaaaataaaacatatcgtttcgtttacatcacaggatagtaagaatggt
gtgaataatctgtgtgatggcagtgacagcagcagaccctggttgtgcagcgtccaggac
cgcagtggagttctcagggtggaattacagatggagcgagtgtctgctataggattcatt
gatgttggcaactgtggctctgcgttcattcagattgatgtcggccgatcctcttggtca
ttagaccatccttatgtcaccctgctgcccactgcaacgctcatgagcccagtggactcg
aaacaaggcattggacgtcaaaatgtgcggatgtttaaaaaagctgattttatccctcag
gctgctgaggagagctgggacagactgcgtgtaacctgcactcagcctttcaacaaacgg
tcacagtttggtctatcctttctgcgtattcgcaccatggaagacgaggctgaagattcc
ccagatattgctcctgaaaatctgcgcacaccagaaaagatgacatctgtgatggagtgg
ctttccagccccgctattcaaaacacgttttttggacgaatcacaggggctgtctcttca
gatgcccaaaggaatccagggagtctgagtcgggccgaacgcatggtcaaagccgcccac
tcaaacagacgctccttgtcaacatccccctccagtactacatccagcacaacacctcag
agagaagataacgtgaaaaccccaccaggtggattaaggacttccagtgaccggaaaaag
actcctcaggagcaaaggaaaaagtctaaagcacggcagagccttataaacagtggcact
ccacggaagagatccagacctacaacatccacccataagcccagctcaacaagcccacac
agaagtacccaacaggctccacaggactctcctgagacgagatgtcctctttgtggagaa
tccttcagtcctgattatctgcctttccatgcttccacctgcctggattctggttcagca
gagctcatgggactcagggaagaaacagaggtcgtgagctcaagacactcttctgttttt
ggctctggcgcagatgagcatatggttccatgtcctctttgctccttccgattcccccca
gaccgtatccagcagcacgccagcacctgtggagacacgctagagccaagtactcccatg
atggaaaacctcacgccagaacaatggcgcgagattgtgaacaagaagttccgcttccct
ccggagctcctcggagccatccgagagggcaacgtgaacatggtctcttcgctgctgaag
acgggtgacggcatcatccgccagctggacgactctgaggacaggctatggagagaagcg
ctgaacttgtccatccgactgggaaacgaggacaccatggacacccttctccacggggtc
aagtttgacttccggcaaatccacgaatctcttctggtggccgtggacaccaaccagcct
cgtgtggtcaagcgtctcctggacaggcttgatctcgagaagggaaacaagatggatgtt
cgctcattctcaatggccatttttgaccactccattgacgattcccagtttgcccccgga
gtgacaccattgacattagcctgtcagaaggatctgtatgacattgtgacaatgcttaat
cagaaaggtcatgaaattccttggccgcataaaatctcatgcgtgtgtctggagtgcagg
aatggacggcaatatgatttgctcaagttctcgttgtctcgtatcaacacctaccgaggt
attgccagccgtgcttacctgtctatcaccgcagaagatgccatgctcactgcctttcga
ctcagcagggatctccgcaagctctctaaaaaggaacctgaatttaagcctcagtatatt
gccctggagcagctgtgccaggagtttgccgtggagctgcttggaatgtgccggaaccaa
agtgaagtcaccaccatcctgaacagccttggtgataaggatgaagacagcgaagacgag
ctggaccagcaggcgtttgaggagggcattccaaacttggctcgcttaaggcttgccgtc
aactataatcaaaaacaatttgtagcccacccgatctgccagcaggtgctctcctccatc
tggtgtgggaacctttcaggttggaggggcagcagaacagcatggaagctcctggtgtct
tttgggatcttcctgaccatgcctttcctttgcctcatctactggatcgcaccaaagtca
aagttggggaagactctaaaaatcccagtgattaagttcctcctccattcggcttcatat
atgtggttcctgatcacgcttctgggggaatctattgccatggaggtgtatcgagacagc
tttgcctctcgtcaacacaccattctgcacagctccttccacatggtctgggtggttggt
tttttctggttcgagtgtaaggaaatttggattgagggcttgagaagttatttcctggac
tggtggaactgtctagatgtgatggttcttagcatgtacctggcttcatttgccctaaga
ctggtcatcttgctcaaggtccactttatctgccagttacctgagaaagaagacgagtgt
gtctacttcaccgagactatgcgtaatgagtggcatcaggaggatccccagttcatcgcc
gaggtgctgtttgcggtgaccagcatgctgagtttcactcgcctggcctacatcctacca
gcacacgagtctcttggtaccctgcagatctccattggaaagatgattgacgacatgatg
agatttatgttcattttggtgatcattggaactgccttcctgtgtggcgtcaacaatatc
tatgtcccatatatgatttcccctaatcttggaaggctaaatgaaaccttcagcttcctc
ttctggactatgtttggcatggccgaccagacctatgtggacatgcctgactttgttttg
gctgagtttgttggccgaatcctttatggcatctacaccctgatcattgtcattgtactt
ctaaacatgctcattgccatgatcaccaactcttttcagaagatcgaggatgatgctgat
gtagagtggaaatttgcccgttcaaagctctacctgagttacttcagagaaggactgact
atgcctgtcccgttcaacatcatcccctctccaaaggccgttttctatcttttaagagga
attgtcagacggatctgctgctgctgcttcaactgtaactctgattcagactaccctccg
cttgcgtctatgaaggatgacatgggtgcaggggagaaccgtattccctacagacagcag
gtcatacgcgctctggtccagcgttacatcgaatctgccaggagagagtttgaagagtcg
aaacgcaaagacgttgggaacaggatcacagagctgagcaaagtgatcgtccagctacac
gctgaaatgaaacgcattcaaacaagcatgattggccactcagacaaccccaaaggagac
ccatcagaaggatcttctttcctggggaagtacatcgttggagccaaaaacaacttcaag
ggcttcaacagtgatgaaagaaacactgttccattacatgagcctatactccatgaagaa
ccagctgaggagactgtcaaagagaaggatgaagagactgcagacgtgcaggagtcacca
accgctgatacagagccagacaggaaggcaaatgaagagcaaaacagtgagggagaaata
gataatgctctggaagacaagaatgagacagaggggggagaagagacaggaaatgatgat
gtcactgagattagcatggatgaagagaaggaggaggaggctgaaaatgatacagagaca
gggaatacaagcgagacagtcatagatatagagtccaatgcagatgctgaaagtgaagct
agtggggaaaacgaagatgagacaatagcagaggaagccactgataatgtggatgaatta
aatacagatgaggagacaggaggaacagatctaaatgaagctgagactgaggaaaatgga
gaagttgaggaaagtagtggaacaacagaagatgaggttgtagttgaagtcatcaatgag
aatgcaggtgagggcatcaagattgacctgaatcagtcaagcctagtgagtttcttagca
aagagaatagaggaaaagctagagaggaatttcagtttcattggaaaccaattgtcatct
ccaaccggcagtgatgactcccaagacaccggttttggttctcaagaatttgacctctca
actagcagtccttaa
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