Garra rufa (doctor fish): 141292047
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Entry
141292047 CDS
T11039
Name
(RefSeq) dynein axonemal intermediate chain 1-like
KO
K10409
dynein axonemal intermediate chain 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
141292047
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
grf03037
]
141292047
04812 Cytoskeleton proteins [BR:
grf04812
]
141292047
Cilium and associated proteins [BR:
grf03037
]
Motile cilia and associated proteins
Dynein arm
141292047
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
141292047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
WD40
Beta-prop_EML_2
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
Beta-prop_HPS5
Beta-prop_EIPR1
WDR55
Beta-prop_WDR19_1st
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_ELP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
MIOS_WD40
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
141292047
NCBI-ProteinID:
XP_073680118
LinkDB
All DBs
Position
19:27481147..27488821
Genome browser
AA seq
480 aa
AA seq
DB search
MSTKEESEDGTLKSKEDKETQTSPCSQKSTKFADFSATASQSEIYDYYDKEIKRRAIKSS
SQSEKEALEDEEETDESQIKVVFGTKNMEDLKYFEDASDEFRGEKGTLLPLWKFEHAKPK
SLSVTALCWDHQHSDLFAVGLGSHEFTQQGGGMVLFYTLRNPNYPEFIFNTSSGVMCIDI
HEHLSYLVAVGMYDGCVAVYNLKKKTDQPFWDNRASSGKHKGAVMQVKWQKDDLDSNHNF
ISVSADGRVVSWTLVKHELVFTDMIKLPVPDTIPDDRKDVFFTVGTSLDFHKQKDSIFLV
GTEYGKIHKGSKLYNRFTETYDAHFMGVSCVRWNPYHPDVFISCSWDWTVKIWDQTMKSP
IFTFELETGAAVTDVAWAPYSSTVFAAVTTEGKVHVFDLSINKYKALCQQKVVSRKTKLF
NIKFNPVHPIIIVGDGRGHVTSLKLSPNLRKKPKDKKGQELPMSLEVEIAKMEQLLSLLR
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaaagaagaaagcgaagatgggacgttgaaatctaaagaggataaagagact
caaaccagtccatgttcacaaaagtccaccaagtttgccgatttcagcgctacagccagt
cagtcagaaatctatgattactatgataaggaaataaagaggcgggcaatcaaatcaagc
agtcagtctgaaaaagaagccctagaggatgaagaagaaacagatgaatcacaaattaag
gtggtgtttggaacaaagaacatggaggatctgaagtactttgaggacgcatcagatgaa
tttagaggagagaagggcactcttctcccactgtggaaatttgagcatgcaaaacccaaa
agtctgtctgtgactgccctctgctgggatcaccaacacagtgatttgttcgctgttggt
cttgggtctcatgaatttactcaacaggggggtggcatggttctcttttacaccctgagg
aaccccaattacccagaattcatcttcaacacgtcctcaggtgtaatgtgcatagacatt
catgaacatctgtcttacctggtggctgtggggatgtatgacggctgtgttgcagtgtac
aacctgaagaaaaagactgatcagcccttttgggacaacagagccagctctggtaaacat
aaaggtgctgtaatgcaggtgaagtggcagaaggatgatttggacagtaatcacaacttc
atctctgtgtctgctgatggacgagtggtgtcttggactcttgtaaagcatgaactagtc
ttcacagatatgatcaagctcccagtcccagacacaattcctgatgaccgtaaggatgtc
tttttcacagttggaacatctctggactttcacaaacaaaaggacagcatttttcttgtt
ggcactgagtatggaaagatccacaagggatccaaactctataatagattcacggagaca
tatgatgcccacttcatgggtgtcagttgtgtgaggtggaatccctaccatcctgacgtc
tttatctcctgcagctgggactggacggtcaaaatttgggatcaaactatgaagtctccc
atattcacctttgaattggaaactggagctgcagtgacagatgtggcctgggctccatac
tcctccactgtgtttgctgctgtcaccactgaaggaaaggttcatgtgttcgacctcagc
atcaacaaatacaaggccctctgccagcaaaaagtggtgtcgaggaagaccaagctcttc
aacattaaattcaaccctgttcatcccatcatcatcgtaggcgatggccgcggccatgtc
accagcctcaagctctctcccaatctccgcaagaagcctaaggataagaagggtcaggag
ttgccaatgagcctggaggtggaaatagcaaagatggagcaactgttaagcttactgaga
tag
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