Garra rufa (doctor fish): 141292176
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Entry
141292176 CDS
T11039
Symbol
ebf1b
Name
(RefSeq) transcription factor COE1-A isoform X1
KO
K09103
early B-cell factor
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141292176 (ebf1b)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
141292176 (ebf1b)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
141292176
NCBI-ProteinID:
XP_073680229
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All DBs
Position
19:8055748..8196996
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AA seq
603 aa
AA seq
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MFGIQESIQRSGSILKEEPIGAGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTSFVGFVEKEKETTGEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVEGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTPSYLEHAAPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYNVPRNHNQ
LTGLTNSSVHASMMGVNSFTGQLAVNVSESSQGGNQGFSRNTSSVSPHGYVPSSTPQQSS
YNTVSTSMNGYGNSGMTNLTGSPSFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGI
FSFSPANMVSAVKQKSAFAPVVRPQSSPPPTCTSTNGNGLQDQSFVDSNKYSTASALQGL
AFS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggattcaggagagcatccaaaggagtgggagtattttgaaagaggagcccatc
ggagccggcatgaacgcagtccgaacatggatgcaaggcgccggggtgctggatgcgaac
acggccgcgcagagtggagtgggactggcccgggcgcacttcgagaaacagccgccctca
aatcttcgcaaatccaacttcttccacttcgttttagccctttatgaccgacaaggacag
ccggtggaaattgagagaacctcttttgtcggatttgtggaaaaagagaaggagactaca
ggagaaaagacaaacaatggcatacattacagactgcaacttctctacagcaacggcatc
agaacagaacaggatttttatgtaagactaattgactccatgactaaacaggccatcata
tatgaaggtcaagacaagaacccggagatgtgccgtgtgctcctgactcatgaaatcatg
tgcagtcgttgttgtgacaaaaagagttgcgggaaccgcaacgagacaccctcggatccc
gtcatcatcgacagatttttcctcaagtttttcctaaaatgcaatcagaactgtctgaag
aatgcaggaaatccacgggacatgcggcgctttcaggtggttgtgtcaacgacggtgagc
gtagaaggacacgttttggctgtttcggacaatatgtttgtgcacaacaactccaaacat
ggtagaagagctcggcgactggacccgtcagagggaacaccgtcatatctggagcatgct
gcaccttgtatcaaagccattagtcccagtgaaggctggacaacaggaggtgctactgtc
atcatcattggagacaacttctttgacggactgcaggtcatcttcggcaccatgttggtc
tggagcgagctcatcacacctcatgcaatcagagttcagacccctcctcgtcacatccct
ggggtggtagaggtcacgctttcctataagtccaaacaattttgcaaaggcacaccagga
agattcatctacacagctctgaatgagcccaccatagactacggttttcagcggttacag
aaggtgatacctcgacatccaggagaccctgaacgcctgccaaaggaagtgattttgaag
agagcagcagatctagtggaagcactttatggaatgcctcataacaaccaggaaattatt
ctcaagcgagcagcagacattgctgaagccctgtacaatgtgccacgaaaccacaaccag
ctcaccggcctcaccaacagctccgtccacgcaagcatgatgggagtgaactccttcact
ggacagctcgccgttaacgtctcagagtcgtctcagggtggaaaccagggtttcagtcgt
aacacaagtagcgtatcaccacatggatatgtgcccagttccacccctcagcagagcagt
tacaatacggtatccaccagcatgaacggctacggcaacagcggcatgaccaacctgacc
ggctccccaagcttcctgaacggctctgcagccaactcgccctacgcaatcgtcccctcc
agcccgaccatggcctcctccaccagcctgccctcaaactgcagcagctcctctggaatc
ttctccttctctccggcaaacatggtttcagctgtgaaacagaagagtgcgttcgctccc
gtcgttcggccccagtcttcacctccacctacatgcaccagcaccaatgggaacggtctc
caagatcagtcttttgtcgactctaacaagtactccacagccagcgcgctccagggcctg
gccttctcctga
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