Garra rufa (doctor fish): 141292200
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Entry
141292200 CDS
T11039
Symbol
dnai1.2
Name
(RefSeq) dynein, axonemal, intermediate chain 1, paralog 2
KO
K10409
dynein axonemal intermediate chain 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
141292200 (dnai1.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
grf03037
]
141292200 (dnai1.2)
04812 Cytoskeleton proteins [BR:
grf04812
]
141292200 (dnai1.2)
Cilium and associated proteins [BR:
grf03037
]
Motile cilia and associated proteins
Dynein arm
141292200 (dnai1.2)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
141292200 (dnai1.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_WDR19_1st
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_RSE1_2nd
EIF3I
WDR55
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
WD40_RFWD3
MIOS_WD40
Beta-prop_TEP1_C
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_ELP1_2nd
Beta-prop_WDR90_POC16_2nd
DUF4191
Motif
Other DBs
NCBI-GeneID:
141292200
NCBI-ProteinID:
XP_073680261
LinkDB
All DBs
Position
19:27131704..27150445
Genome browser
AA seq
660 aa
AA seq
DB search
MSVPHKVGTVKSKQAPNVTTQQKAAVAKGVKVIGKKKDEEEGLDAAEGDEWMQGKTLVKP
PDQLDLTEAELNEEITRVLTANNPNAPQNVVRYSFKEGCYKPIVFVDQMAIHFELEGNLV
HKESDEGRRLTAKQAQVDDGGGDERSDNVAIKASKREQKLTNQFNFNERASQTLNNPPRD
ISCQTEPPPRANFSATANQWEIYDFYVEELQRREKSKEKPEGQLLNKEDDKSKKKMIQAE
TQNDDISQLAKAVKIIERMVNQNIFDDVSQDFMYFDDASDEFRGEKGTLLPLWTFQYDKA
KSLSVTALCWNHKYNDLFAVGLGSHEFTQQGGGMVLFYTLKNPNYPEFIFNTASGVMCVD
IHEHLSYLVAVGMYDGCVAVYNLKKKTDQPIYNSRASSGKHTSAVMQVKWQKDDLDSNHN
FISVSADGRVVSWTLVKHELVFTDIIKLPVIDTIPDDLKDVIPTVGTSLDFHKQKDYSFL
VGTEHGKIHKGSKYYSSKFLETYDSHFMTVTRVRWNPFHPDVFISCGWDWMVKIWDQTMK
SPVFTFELKTSVTDVAWAPYSSTVFAAVTTDGKVHVFDLNINKYEALCQQKVVSKKTRLL
HIEFNPVHPIIIVGDDRGHVTSLKLSPNLRKKPKEKKGQEMPKGPEVEIAKMEQLLSSLR
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttcctcacaaagttgggacagtgaaatctaaacaggcacctaatgttaccacc
cagcaaaaggcagctgtggcaaagggtgtcaaggtcattggaaagaagaaggatgaagag
gaagggctagacgcagccgaaggagatgaatggatgcaggggaagactcttgtgaagcct
ccagaccagctggacctaactgaggcagagctgaatgaagaaattaccagagtactaaca
gcaaacaatccaaacgctccacagaacgttgtcagatacagtttcaaagagggctgctat
aaaccaattgtctttgtggatcagatggctattcactttgaactagaaggaaatcttgtg
cacaaggaatctgacgaaggtcggagattgacggctaaacaggctcaagttgatgatggt
ggaggagatgagaggtcagacaatgtggccatcaaagctagcaagagagagcagaaactc
accaaccaattcaacttcaacgagagagcctctcagacactaaacaaccctccaagagat
ataagttgtcaaactgagcctcctcctcgtgcaaacttctcagctacagccaatcagtgg
gagatctatgacttttacgtagaggagcttcaaaggcgcgagaaaagtaaagagaagccc
gaaggccagttattaaataaggaggatgacaagagcaagaagaagatgattcaagctgag
actcagaatgatgacatatcccagctagctaaggcagtcaagatcattgagcgtatggtg
aatcaaaatatatttgatgatgtttcacaagatttcatgtattttgatgacgcatctgac
gaatttagaggagagaaaggcactcttctcccactatggacattccagtatgataaagcc
aaaagtctgtctgtgactgccctctgctggaatcacaaatacaatgatttgtttgctgtt
ggccttgggtcacatgaatttactcaacaggggggtggcatggttctattttacaccctg
aagaaccccaattacccagaattcatctttaacacagcctcaggtgtaatgtgtgtagac
atccatgaacatctgtcttacctggtggctgtgggaatgtatgacggctgtgttgcagtg
tacaacctgaagaaaaagactgatcagcccatttataacagcagagccagctccggcaaa
cacacaagtgctgtgatgcaggtgaagtggcagaaagatgatttggacagtaatcacaac
ttcatctctgtgtctgctgatggacgagtggtgtcttggactcttgtaaagcatgaacta
gtcttcacagacattatcaagctcccagtcatcgacacaattccggatgaccttaaggat
gtcattcctacagttggaacatctttggactttcacaaacaaaaggactacagttttctt
gttggcactgagcatggaaagattcacaagggctccaaatactattctagcaagtttctg
gaaacatatgattcccactttatgactgtcactcgtgtgaggtggaatcctttccatcct
gatgtctttatctcctgcggctgggactggatggtcaaaatttgggatcaaactatgaag
tcccctgtgttcacctttgaactgaaaacttcagtgacagatgtggcctgggctccatac
tcctctaccgtctttgctgctgtcaccactgatggaaaggttcatgtgttcgacctcaac
atcaacaaatatgaggctctttgccagcaaaaagtggtgtccaagaagaccaggctcttg
cacatcgaattcaaccctgtccatcccatcatcatcgtgggcgatgaccgcggccatgtc
accagcctcaagctctctcccaacctccgcaagaagcctaaggagaagaaaggtcaggag
atgccgaaggggccggaggtggaaatagcaaagatggagcaactgctgagctcgctgaga
tag
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