Garra rufa (doctor fish): 141292224
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Entry
141292224 CDS
T11039
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF2-like
KO
K15713
E3 ubiquitin-protein ligase UHRF2 [EC:
2.3.2.27
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141292224
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141292224
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141292224
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
zf-RING_10
PHD_2
Rad60-SLD
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-RING_5
HicB-like_2
Motif
Other DBs
NCBI-GeneID:
141292224
NCBI-ProteinID:
XP_073680298
LinkDB
All DBs
Position
19:complement(41742618..41801723)
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AA seq
887 aa
AA seq
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MWIQIRTIDGKETRTVEDLSRLTKIESLRVKIRDIFNVKPEQQRLFYRGKQMEDGQTLFD
YNVGLNDIVQLLIRSQTDPPDSPSLNNGEGVDCAVAPPTTASDPASDTPTATPATTAVSP
ATIANSNGNGSKSCSPASDSQPSTSSRTFLIDPGIGIFRVNELVDCRDVSIGAWFEGVIE
KVTPASKGQNGRAETAPPPARVGRPSKRTNGKLESETAAAPSSSSSSSSTDNHSTALHTD
ASEPSTSKTDPADVSYHIKYEDYPENGVVEMSADDVRPRARTVLRFDQLQVGDVVMVNYN
LENPEERGFWYDAEITSLNAVSRTNKEIHVKILLGGPGDVIGDCKLQFLDEIYRIEKPGA
TALSAADGPFKRKTGPECKHCKADPEVECRFCSCCVCGGKQDAHMQLLCDECNMAFHIYC
LNPPLSAIPEDEDWYCPTCKNDSSEVVKAGEKLRTSKKKSKMPSATTESQRDWGKGMACV
GRTKECTIVPSNHYGPVPGVPVGTTWKFRVQVSEAGVHRPHVGGIHGRSNDGSYSLVLAG
GFEDEVDRGDEFTYTGSGGRDLSGNKRIGEHSFDQTLTHMNRALALNCDAPLNDKDGAES
RNWRAGKPVRVIRSSKGRRISKYAPEEGNRYDGIYKVVKYWPEIGKCGFLVWRYLLRRDD
LEPAPWTPEGIERSKKLGLKVQYPPGYLEAMANKTKREATVRAVGSSSRGRKRGRPRTGR
PSKRVQEEEEEKPEENMEEELQSNGSADTHEEESTGVCEQQEEPPVKRLKEVESFVLSEQ
QRNLIQEDEPNRKLWDEAMSFLSEGPNFLRKVEQLFMCVCCQELSFQPVTTECSHNVCKT
CLQRSFRAEVFTCPACRHDLGKDYSMSLNKTLQLLLDQFFPGYSKGR
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtggattcagatccggacgatcgacggcaaagagacgcggacggtggaggatctgtcg
cgcctcacgaagatcgagtcgctgcgcgtgaagatccgagacatcttcaacgtgaagccc
gagcagcagagactcttctaccgaggaaaacagatggaagatggtcagacgctcttcgat
tataacgtcggtcttaacgacatcgtccagctcctcattcgctcacagaccgacccgccg
gatagcccctccctcaacaacggcgagggcgtggactgtgccgtagctccacccaccaca
gcatctgaccccgcctcagacacacccacagccacacccgctacaacagccgtttcccca
gcaaccatcgccaacagcaacggaaacgggtccaaatcctgcagtccagcatccgacagt
caaccgtccacatccagccggaccttcctcatcgatcccgggatcggtatcttcagagtg
aatgagttagtggactgcagggacgtcagcatcggtgcttggttcgaaggcgtgattgaa
aaagtgactcctgcgtctaaaggacagaacggcagagccgaaacagcgccccctcctgcc
agagtaggcagacccagcaaacggactaatggcaagctggagtcagaaacggccgccgct
ccttcatcctcctcatcatcctcatccacggacaatcacagcacagcgttacacacagac
gccagcgaaccgtccacctccaaaacggatccggcggacgtctcctaccacattaaatat
gaagattacccagagaacggcgtggtggagatgagcgcggatgacgttcgaccgcgggcc
agaactgtgctgcgtttcgaccagctgcaggtgggtgacgtggtgatggtcaactacaac
ctggagaatcctgaggagcgaggattctggtacgacgccgagatcacgtccctcaacgcc
gtctcacgcaccaacaaagagatccacgtcaagattctgctgggaggtccgggtgatgtg
attggtgactgtaagctgcagtttctggatgagatctacaggatagagaaacccggagcg
acagcgctgtccgccgcagacggcccgttcaaacgtaagacgggtccggagtgtaagcac
tgtaaagcggatccggaggtggagtgccgcttctgttcgtgttgcgtctgcggcgggaag
caggacgctcacatgcagctgctgtgtgacgagtgtaacatggcgttccacatctactgc
ctgaacccgccgctgtccgccataccagaggatgaggactggtattgtcccacctgtaag
aacgacagcagtgaggtggtgaaagccggagagaagctcagaaccagcaagaagaaatcc
aagatgccgtcagcgaccacagagagccagagagactggggaaagggtatggcgtgtgtg
ggccgcactaaagagtgcacaatcgtcccctccaatcactacggccccgttcccggcgtc
cctgtcggaaccacatggaagtttcgtgttcaggtgagcgaggcgggcgtccacaggcct
cacgtcggtgggattcacggacgcagtaacgacggctcgtactcgctggtgctcgctgga
ggattcgaggatgaagttgatcggggcgacgagttcacctacaccggcagcggaggtcgc
gacctttccggaaacaagcgtatcggcgagcactcgttcgaccagacgctgacgcacatg
aacagggctctggcgctcaactgtgacgcccctctgaacgacaaggacggggcggagtct
cgcaactggagggcggggaaaccggtgagagtcattcgcagctcgaagggccgacggatc
agcaaatacgcgccggaggagggaaaccgctacgacggcatttataaggtggtgaagtac
tggccggagatcgggaagtgcggattcctggtttggcggtacctgctgcggcgggacgat
ctggagccggccccctggactccggaagggatcgaacgcagcaagaaactcggcctcaaa
gtccagtatcctcctggttatctggaggccatggccaataagacaaagcgtgaggcgacg
gtgcgagcggtgggcagctcctcacgcggaaggaagagaggacgaccccggaccggtcga
ccgtccaagagagtccaggaggaggaggaagagaaacctgaggagaacatggaggaagag
cttcagagcaacggcagcgcagacactcatgaagaagagagcacgggtgtgtgtgagcag
caggaggagccgccggtcaagcgtctgaaggaagtggaatcgttcgttctgtcagaacag
cagcggaatctgatacaggaagacgaacccaacaggaaactgtgggatgaggcgatgagc
ttcctatcggagggaccgaacttcctgcgtaaggtggagcagctgttcatgtgtgtttgc
tgtcaggaactgtccttccagcccgtcaccactgagtgttcacacaacgtctgcaagacg
tgtctgcagcggtcgttccgcgccgaggtgttcacctgccccgcctgccgccacgacctg
ggcaaagactactccatgagcctcaacaaaaccctacagctgctcctggatcagttcttc
cccggatacagcaaaggacgatga
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