Garra rufa (doctor fish): 141292226
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Entry
141292226 CDS
T11039
Symbol
birc2
Name
(RefSeq) baculoviral IAP repeat-containing protein 2 isoform X1
KO
K16060
baculoviral IAP repeat-containing protein 2/3
Organism
grf Garra rufa (doctor fish)
Pathway
grf04120
Ubiquitin mediated proteolysis
grf04210
Apoptosis
grf04217
Necroptosis
grf04510
Focal adhesion
grf04621
NOD-like receptor signaling pathway
grf05132
Salmonella infection
grf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141292226 (birc2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
141292226 (birc2)
04217 Necroptosis
141292226 (birc2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
141292226 (birc2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
141292226 (birc2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141292226 (birc2)
09171 Infectious disease: bacterial
05132 Salmonella infection
141292226 (birc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
grf01002
]
141292226 (birc2)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141292226 (birc2)
Peptidases and inhibitors [BR:
grf01002
]
Peptidase inhibitors
Family I32: IAP family
141292226 (birc2)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141292226 (birc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
UBA_BIRC2-3
CARD
zf-C3HC4_3
Prok-RING_4
zf-RING_5
zf-RING_2
zf-C3HC4_2
DUF2039
SHOCT_2
PMC2NT
Motif
Other DBs
NCBI-GeneID:
141292226
NCBI-ProteinID:
XP_073680300
LinkDB
All DBs
Position
19:complement(23549515..23558704)
Genome browser
AA seq
654 aa
AA seq
DB search
MFVILFAHRVFKSFSLLDIPFPFAFEMEIIQNSAFLRGLCRNSGPADLQYDNSSELFRIS
TYAKFPASAPVTERSLARAGFYYTGVGDRVQCFRCNVTADNWQSGDCPADRHKQLSPTCS
FIQSLPATTNLLSSSHSAFSPLRNVAILQLSAPATTGASTTSASSSGQTEEQVGYLNMGF
SNLAPSSPISSRVVEDMSHQRPPACHNPSMRREQERLDTFQNWTLITVTPAELAKAGFYY
LGQGDRVACFSCGGQLSNWEPGDRAVSEHQRHYPNCRFVRGDRADNIPLSGGGLSNVSNS
AMQQCEERLLTFVNWPSRIPVRPDQLAKAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWV
EHAKWFPRCEYLLQEKGQEFVHQIQARFPRLFEQLLTNGDSNAREFVDPPVVHLGPGEDR
SEDAVMMNNPVVKSALEMGFERSLVKQTVQSKILTSGENYKTVQELVSDLLSAEDEKREE
ERELLAEEMASDGFTFLKKHHAALTQRLKSVQSLMDHLLEENVISQKEYDTIRNCTSVKQ
QTGQLIDLVLSKGNAASEVFRNWIKKNDVYLLRELMAQTNEAASPSQDLSDLPMEEQLRR
LQEERTCKVCMDKEVNIVFIPCGHLVVCKECAPSLRKCPICRGLVKGTVRTFLS
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtaatcttgtttgcacacagggtattcaagtccttctctctgctggacatccct
ttcccctttgcttttgaaatggaaataatacaaaatagtgctttcctgagaggtttgtgt
cgcaatagcggccctgccgatttacaatatgataattcttctgaactctttcgcatatcc
acgtatgctaaattccccgcctctgcgccagtgacagagaggagtcttgctcgagcaggc
ttttattacactggagtgggcgaccgtgtccaatgtttccgctgcaatgtgacggccgac
aactggcagtccggggactgccctgctgatcgccacaaacagctgtctcccacctgcagc
ttcatccagagtttacccgccaccacaaacctcctgtcgtcctctcactcagccttttcc
ccgcttcgcaatgtagcaattctgcagctgtctgcccctgcaaccacaggagcatcaact
acttcggcatcatcttcaggccaaacagaagagcaggtgggttacctgaacatgggattc
agcaacctggccccctccagtcctatttcttctcgtgtagtggaggatatgtctcaccag
cgaccaccagcttgtcacaatcccagtatgcgccgggaacaggagcgccttgacaccttt
caaaattggactcttattaccgtaactccagctgagctcgccaaagctggtttctactac
cttggccagggcgacagagtggcttgttttagttgtggtggccagctaagcaactgggaa
ccaggagaccgggcggtttctgagcaccagaggcattaccccaactgccggttcgttcga
ggcgaccgtgcagataacataccgttatctggtggcggcctttccaatgtatccaactct
gcaatgcaacagtgtgaagaacggctgctcacatttgtcaactggccctcaagaatacct
gttcgaccagaccaattggctaaagctgggttttactatgttggtcgtaacgatgacgtc
aagtgcttttgttgtgatggtggactcagatgttgggaatctggtgatgatccatgggta
gaacatgctaaatggtttccaagatgtgaatacctgttgcaagaaaagggccaagaattt
gttcatcagattcaagcaagatttccaagactatttgaacagctcttgaccaatggagac
agcaacgcgagagaatttgttgatccacctgttgtacacctgggtcctggagaagaccgt
tcagaagatgcagtgatgatgaacaaccctgttgtgaaatcagcgttagaaatgggattc
gagcgtagcctggtgaagcaaacagtccaaagcaagattcttacaagtggagagaattac
aaaaccgttcaagaactggtgtccgatttactaagtgcagaagatgaaaagagagaggag
gagcgagaacttcttgctgaggagatggcttcagatgggtttactttccttaagaaacat
catgctgccttgacacagcgtcttaaaagcgtccagagcttaatggatcatcttcttgag
gagaatgtcatctcacagaaagagtatgacactattcgtaactgcacttcagtcaagcag
caaacagggcagctcattgatttggtgctgtcgaaaggaaacgcagcgtcagaagttttc
cgcaactggatcaagaaaaacgacgtgtacctgctgagagaactgatggcccagacaaat
gaagctgcatcaccgagtcaagatctttcagacttacctatggaggaacagttgagaaga
cttcaagaggagcgcacatgcaaagtttgcatggacaaggaggtcaacatcgtcttcatc
ccatgtggtcacctagtggtatgcaaagagtgcgcgccttctttacggaagtgccccata
tgtagaggattggtcaaaggcactgtccgtactttcctatcataa
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