Garra rufa (doctor fish): 141292282
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Entry
141292282 CDS
T11039
Symbol
ndst1b
Name
(RefSeq) bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1b
KO
K02576
heparan sulfate N-deacetylase/N-sulfotransferase NDST1 [EC:3.5.1.-
2.8.2.8
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
grf01100
Metabolic pathways
Module
grf_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
141292282 (ndst1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
grf01003
]
141292282 (ndst1b)
Enzymes [BR:
grf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.8 [heparan sulfate]-glucosamine N-sulfotransferase
141292282 (ndst1b)
Glycosyltransferases [BR:
grf01003
]
Unclassified
Sulfotransferases
141292282 (ndst1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSNSD-CE
HSNSD_N
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
141292282
NCBI-ProteinID:
XP_073680388
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Position
19:complement(15759470..15870503)
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AA seq
886 aa
AA seq
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MMLMCGRVRRLFRQLTLQTSLLLLFLFCMVSVIISAYFLYGVKRDLEPAGVGGVGVPEEG
TADWEDPRATPSPPSARVLPARTAKPADMSRTDPVVLVFVESLYSQLGQDIVAILESGRF
RYQTEIAPGKGDMPTLTDKNRGRFTLVIYENILKYVNLDAWNRELLDKYCVEYGVGIIGF
FKANENSLQSAQLKGFPLFLHSNLGLRDCSVNPKSPLLLITKAREVEHGPLPGDDWTVFQ
SNHTTYEPVLLARGRSTEASGAPGPLHAAVVQDLGLHDGIQRVLFGNNLNFWLHKLVLVD
AVSFLTGKRLSLALERYVLVDIDDIFVGKEGTRMKVSDVKALLETQNELRTHVPNFTFNL
GFSGKFFHAGTDEEDLGDDLLLSYGKEFWWFPHMWSHMQPHLFHNQSVLAEQMLLNRKFA
EEHGIPTNMGYAVAPHHSGVYPIHLQLYEAWKKVWGIKVTSTEEYPHLKPARFRRGFIHS
GISVLPRQTCGLFTHTIFYNEYPGGSKELDKLINGGELFLTVLLNPISIFMTHLSNYGND
RLGLYTFKNLVKFLQMWTNLKLQTLPPVQLAQRYFQIFPEERDPIWQDPCEDKRHKDIWS
KEKTCDRFPKLLIIGPQKTGTTALYLFLGMHPDLTSNYPSKETFEEIQFFNGRNYHKGID
WYMEYFPLPSNTSSDFYFEKSANYFDSEVAARRAAALLPKAKIITILINPADRAYSWYQH
QRAHDDPVAQKYTFHDVITAGRDAPIKLRVLQSRCLVPGLYATHLQRWLTHYHPSQILVL
DGQMLRTEPASVMDKIQKFLGLTNTLNYHKILAFDPKKGFWCQLLDGGKTKCLGKSKGRR
YPDMDVDSRSFLREYYHEHNIELSKLLYKMGQPLPSWLREELLHSR
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgatgtgtggacgtgtgaggcggctcttccgtcagctcacgctgcagaccagc
ctgctgctgctcttccttttctgcatggtcagtgtcatcatctcagcctacttcttgtat
ggcgttaaacgggacctcgaacccgcaggagttggaggtgtgggggtcccggaagaaggg
actgcagattgggaagatccccgggcgactccttcccctccgtcagcaagggttctgcct
gccagaaccgccaagccagcagacatgtctcgaaccgaccctgtggtactagtgtttgtg
gagagcttgtattcccagttgggccaggacatcgtggccatcttggaatctgggagattt
cggtaccagactgagatcgcacctgggaagggtgatatgcccacacttacagacaagaac
cggggtcgatttacgcttgtcatctatgagaacatccttaagtatgtcaacctggatgct
tggaacagggagttgctggacaagtactgcgtggagtatggcgttggcatcatcggcttt
ttcaaggctaatgagaacagtttgcagagcgcccagctcaagggctttcctctcttcctg
cactccaatctgggtttaagggactgtagcgtcaatcccaagtctccactgctgctcatc
accaaggcccgggaggtagagcacggccccttacctggagacgactggacggtctttcag
tctaaccataccacctacgaacctgtgctgttagctcggggacggagtacggaggccagt
ggagctcctggaccccttcatgcagctgtggttcaggatttgggtcttcatgatggcatc
cagcgggtactcttcggcaacaacctgaacttttggctgcacaaactggtgctggtggac
gcagtgagtttcttaactggcaaacgtctctcattggctcttgagcgctacgtactggtg
gatatcgatgacatctttgttggaaaggagggcacaaggatgaaggtgtctgacgtcaag
gccctactggagacgcagaatgaactccgaacccacgtgcccaatttcaccttcaacttg
ggattctccggaaagttcttccatgctggcacagacgaggaggatcttggagatgacctg
cttttgtcctatggtaaggagttctggtggttcccccacatgtggagtcacatgcagcca
catctcttccacaaccagtccgtgctggccgaacaaatgctgctcaaccgaaagtttgca
gaggagcatggcattcccacaaacatgggttatgcggtggctccgcatcactctggagtg
tatcctattcatttgcagctgtacgaggcctggaagaaagtgtggggcatcaaagtgacc
agtacggaggagtatccccacctcaaacccgcacgcttccgcaggggcttcattcacagt
ggcatcagtgtgttacccagacagacctgtggtctctttactcacacaatcttctataat
gagtatcctggaggctctaaagagttggataaactcataaatggaggagagcttttccta
acagtgcttctcaacccaatcagcatcttcatgacccacctgtccaactacgggaatgat
cgtcttggcctgtacaccttcaagaacctggtgaagttcctacagatgtggaccaacctg
aaactgcagactctcccgcctgtacagctggcacagagatattttcaaatcttccctgaa
gagagggaccccatctggcaggacccctgtgaggacaaaagacacaaagacatctggtct
aaagaaaagacctgtgaccgtttccccaagctgcttatcatcggacctcagaagactgga
actactgctctctatttgttcctgggcatgcatcctgatttgacaagtaactaccccagc
aaggagacctttgaagaaatccagttcttcaatggccgaaactaccacaaaggcattgac
tggtacatggagtatttccctctaccctccaacactagctcagatttctactttgagaaa
agtgccaactacttcgactcggaggtcgcggcccggcgagcagctgctcttctgcccaaa
gccaaaatcatcaccatccttatcaacccggctgacagagcctattcctggtatcagcac
cagagggctcatgatgatcctgtggctcagaaatacacattccatgatgtcatcactgct
ggccgggacgcgcccatcaaactgagggtcctgcagagccgttgtctagtgcccggactt
tacgccacacacctacagcgctggctcacacactatcaccccagtcagatcctggtcttg
gatggacagatgctgaggacagaaccagcttcagtgatggacaaaatccagaagtttcta
ggcctgactaacacgctcaactaccacaagatccttgcgttcgatccgaaaaagggcttc
tggtgccagctgctagatggagggaagaccaaatgcctggggaagagtaaagggaggaga
tatcctgacatggacgttgattcccggagcttcctgagagagtattaccatgagcacaac
attgagctctccaagctgctgtacaaaatgggccagccgctgcctagctggcttagagag
gagttgctccacagcaggtaa
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