Garra rufa (doctor fish): 141292286
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Entry
141292286 CDS
T11039
Symbol
gabra1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-1
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
grf Garra rufa (doctor fish)
Pathway
grf04080
Neuroactive ligand-receptor interaction
grf04082
Neuroactive ligand signaling
grf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
141292286 (gabra1)
04082 Neuroactive ligand signaling
141292286 (gabra1)
04519 Cadherin signaling
141292286 (gabra1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141292286 (gabra1)
Ion channels [BR:
grf04040
]
Ligand-gated channels
GABA-A
141292286 (gabra1)
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
141292286
NCBI-ProteinID:
XP_073680392
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Position
19:14077508..14113354
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AA seq
458 aa
AA seq
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MMWGGRGAAWLWIWACLLVTNVLAGKSSSQTAEEQKDNTTVFTRILDSLLDGYDNRLRPG
LGERVTEVKTDIFVTSIGPVSDHDMEYTIDVFFRQSWKDERLKFKGPMAVLRLNNLMASK
IWTPDTFFHNGKKSVAHNMTMPNKLLRITEEGTLLYTMRLTVRAECPMHLEDFPMDAHAC
PLKFGSYAYTRAEVVYVWTRGAAQSVVVADDGSRLNQYDLMGQTVDSGVVQSSTGEYVVM
TTHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISA
RNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGYAWDGKSVVPEKQKKKKES
LLKKNNTYTAATATAFAPNIARDPGLATIAKSAPPPPTEPKEEPKPKPPEAKKTFNSVSK
IDRIARIAFPLLFGTFNLVYWATYLNKKPKLQGMMQPH
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgatgtggggtggaagaggagcagcttggctttggatttgggcctgtttactggtgacc
aatgttctggctggaaaaagctccagtcagaccgcagaggagcagaaagacaacactaca
gttttcaccaggattctggacagccttctcgatggctacgacaaccgtctcaggcctggg
ctcggagagcgtgtaaccgaagtcaagactgacattttcgtgacgagtattggaccggtc
tcggaccatgacatggagtacaccatagatgtgttcttcaggcagagctggaaggatgag
aggctgaagttcaaaggtcccatggcggtgctccgtctcaacaatctcatggctagcaaa
atctggactcccgacacgtttttccacaacggaaagaagtcagtcgcccataacatgacc
atgcctaacaaacttctgcggatcacagaggaaggaactttgctttacaccatgaggctt
acagtcagagctgaatgtccaatgcatttggaggacttcccaatggacgcccatgcttgc
cctctcaaattcggcagctatgcctacacgagggctgaagtggtgtacgtatggacgcgt
ggggcggcgcagtctgtggtggtggctgacgacggctcccgactcaaccagtatgacttg
atgggacagaccgtggactctggtgtggtgcagtccagcactggagagtatgttgtcatg
acaacacatttccacctcaaaaggaagatcggttactttgtcatccagacgtatttgccg
tgtatcatgaccgtgatcctgtcccaggtgtccttctggctaaacagggaatctgtccct
gccagaactgtgttcggagtgaccactgtacttaccatgaccaccctgagtatcagcgcc
agaaactctctccctaaggtggcttatgccacagccatggactggttcatcgctgtttgt
tacgcctttgtcttctcagctctcattgagtttgccactgtaaactacttcaccaagagg
ggttacgcctgggatggaaaaagcgtggtgcccgaaaagcaaaagaagaagaaggagtca
ttactgaaaaagaacaacacctacacggctgcgacggcaacagcgtttgctccgaacatt
gccagagaccctggtttggcaaccattgctaaaagtgccccccctccgccaaccgagccc
aaggaagagccaaaacccaaacctccggaggcgaagaagaccttcaacagcgtgagcaag
atcgacaggattgccagaatagccttcccgttgctcttcggaacctttaacttggtgtat
tgggccacttacttgaataaaaaacccaaactacagggcatgatgcagccacactaa
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