Garra rufa (doctor fish): 141292343
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Entry
141292343 CDS
T11039
Symbol
limk1b
Name
(RefSeq) LIM domain kinase 1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
141292343 (limk1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
grf01001
]
141292343 (limk1b)
Enzymes [BR:
grf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
141292343 (limk1b)
Protein kinases [BR:
grf01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
141292343 (limk1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
ABC1
RIO1
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
141292343
NCBI-ProteinID:
XP_073680452
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All DBs
Position
19:6121429..6133847
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AA seq
618 aa
AA seq
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MLKSCQDLYCRRGGKARCCECNSVLSNWYYERDGQFFCKKDYWARFGEQCHGCSESITTG
LIMVAGKHKYHPECFLCESCGVFIGDGDSFTLVDYTNLYCGECGHQKVSMQHSAAKCSQL
PHTVTSMSFPPSAESRQGLSFKVEEKDAGPLITVSQMDMHSLSPEMKPLIHVGDRILEIN
GISVQNIPLNEIDLLVNDTEHWLQITTEHDPKEHTKQEDLSGLLGEELDQPGKLGFFPPP
SNRRIQTSPRSRNILRSCSIDKAPCSQRHAALLSHRRDINRSQSLRSDPIDKTQRIFRPS
DLMYGEVLGKGCFGQAIKVTHLETGEVMVIKELLQFDEDTQKTFLKEVKVMRCLEHPNVL
RFIGILYKDKRLNLISEYVQGGTLRDTILKMDKDYPWKRRVSYVKDIAAGMAYLHSMNII
HRDLNSHNCFVRENQTVVVADFGLAQLVKEEKSSSPGQMSKLNKLGRKKRYTVVGNPYWM
APEMIQGKVYDEHVDIFSFGIIVCEIIGRVYADPDYLPRTQEFGLNVNEFLERCWSSDCP
ASFFPIAVLCCALEAEKRPSFAKLEEWLENLMMHMEIKLPLMSELDKICQAFWEKHNQSK
QTYGIPSKEMENSALGRS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtcttgtcaggacctgtattgccggagaggaggaaaggcaaggtgttgtgaa
tgtaattctgttctttctaactggtactatgaaagagatggacagttcttctgtaagaaa
gattactgggcacgatttggggagcaatgccacggctgctcagagtctatcaccaccggt
ctcattatggtggctgggaagcataaataccatcccgagtgttttctctgtgaaagctgt
ggcgtgtttattggagatggggattctttcactctagtggattatactaatttatactgc
ggtgaatgtggacaccagaaggtgtcgatgcagcactcagcagcaaaatgttcacagctt
cctcatacagtgacatcaatgtcatttcctccttctgcagaaagcagacaaggtttatcc
tttaaagtggaagagaaggacgcaggccctttgatcaccgtatctcaaatggacatgcac
agcctgagccctgaaatgaagcctttgatccatgttggagacaggattcttgagatcaat
ggaatttctgtccaaaacattccactcaatgagatagatctgctggttaatgatacagag
cactggttacaaatcacaactgaacatgatcctaaagaacacacaaaacaagaagacttg
tcgggcctactgggagaagaactggaccagcctggaaaactgggtttctttccccctccc
agcaacagacgaatccagacgagccctcgatctaggaatattctacgcagctgcagtatt
gataaagctccgtgctcgcaaagacacgctgcacttctttcccacagaagagacattaat
cgatcacagtctctgcgttctgaccctattgacaaaacacagcgtatcttccgaccctcc
gacctaatgtacggggaagttttgggaaaaggttgttttggacaagccataaaggtgaca
catttggaaacaggtgaggtcatggtgattaaggaacttcttcagttcgatgaagacact
caaaagacattcctgaaagaggttaaagtaatgagatgcctagaacatcctaatgtctta
aggtttattggcattctctacaaagacaaacgactgaacctgatctccgagtatgtgcaa
ggaggaacgctgagggacaccatactgaaaatggacaaggattacccttggaaacgtaga
gtgagctatgtcaaggacattgctgctggaatggcttacctacattcaatgaatatcatt
catcgggatctaaactcacacaactgctttgtccgagagaaccaaaccgtggtagttgct
gactttggtttggcccagcttgtaaaggaagaaaagagctcctctccaggacaaatgtcc
aaattgaacaagcttggtcgtaaaaaacgatatacagtggtgggcaacccctactggatg
gcaccagaaatgatccaaggaaaagtctatgatgagcatgttgacattttctcattcggg
attattgtttgtgagattattggaagagtatatgccgatccagattacctccctcgcaca
caggagtttgggctgaatgtgaatgaattcttggagcgctgttggtccagcgattgccct
gcgtctttctttccgattgccgttctgtgttgtgccttggaggctgaaaaacgtcccagt
tttgctaaattagaggagtggctggagaacctgatgatgcacatggagattaaacttcct
ctgatgtcagaactggataaaatctgccaagcgttttgggagaaacacaaccaatcaaaa
caaacttacgggattccttcgaaagagatggagaactcagccttaggcagaagctga
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