Garra rufa (doctor fish): 141292363
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Entry
141292363 CDS
T11039
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04510
Focal adhesion
grf04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141292363 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
141292363 (rapgef1b)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Pacs-1
Motif
Other DBs
NCBI-GeneID:
141292363
NCBI-ProteinID:
XP_073680472
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Position
19:complement(38307270..38368984)
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AA seq
1192 aa
AA seq
DB search
MGNSSRRTQPLLEETDYFYAGDADTESQKSHLSSFTMKLMKFHSPKIKRTPSKKSKQLQP
EPTVTTPEKPVNKKVSRLEEQEKEVVSALRYFKTIVDKMSVDTKVLQMLPGSASKILEAI
LPLMQVEARIQHSSAVSSCHNRVYQSLANLIRWSDQVMLEGIDLDDKDTVTTVTTVIKAV
LDGVKELVKLTIEKQEQPSPTSPNKPAPPVTKPESVCENPLTEREKAILSKTTPIVTPTD
SLTDMSEEEVAPPKPPLPGVKLAEHRKRMQLCSDPVAGQRRATAMETPPALPPKKRQSAP
SPTRVAVVAPMSRVPCGLNLPPGALRQQQEFDVDLLQRRFSGGSQSYGGDSPRLSPCNSM
GKLSKSDEQLSSLERDSGQCSRNTSCETLEGYDPDYDFLHQDLSVAEPLPFPTGGSSLSP
LPECHGESQSLSPAHPRFSAPVTNQASLEYWTPPGPTNSVLPPALPQKKRRSAPIISAYP
LYERLPSHYDNLSEEEQPTPPFPLVTPVSPLPQVNGGDDLSQCTDADSPPPLPEKKGKQI
LQYMQFVEDYSEPQPSVFYQMPQNESIYEQRRNKRFQEVYGFNDSYSSSDSVHEPVPPPA
LPPKQRQLASYTSSPPSSSSSSFSILPPPAGLPEEAEPALGLSLSVSSSFLSGHTSLTTP
VSSDLVGLTNAGKALDGGGVSNGSLTSSLVSLAVCLPSESSLSDSLLTSASESVDEGGEG
EYVNLYSSTQANGENTHRTDPSSCDDVLQDHTPHIPTSNSKEALSKDRPKEPSHSQIDDV
DELSLIDHNDIMNRITLKAENDDGPDVRAGSGDILLVHATETDRKDLVLYCEAFLTTYRT
FITPEDLIKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILRQLMDL
VFRLVCNGELSLARVLRKNILDKVEQKRLLRHMHMLKPLAARGVSARPGTLHDFRSHEIA
DQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQD
REKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSS
SFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDFIDGKVNFSKRWQQFNILDSMRRF
QQVHYELKRNEDIVSFFNDFSDHLAEEALWELSLKIKPRNISRRRTEREEKT
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacagcagccgccgaacccaacctcttctagaggagacggactatttttatgca
ggagatgcagatacagaatcccagaagtctcacctctcctctttcacaatgaaattgatg
aaattccattctccgaagattaaacgaaccccgtctaagaaaagcaaacagctccagcca
gagcctacggtgacgactccggagaaacctgtcaacaagaaggtgagtcgattggaggaa
caggagaaggaggtggtgagtgctctacgttacttcaagacaatcgtcgacaagatgagc
gtcgatacgaaagttttgcagatgcttcctggatcggctagtaaaatattggaggccata
ttgcctctgatgcaggtagaggctcggatacagcacagctcggcagtgtcctcctgtcat
aaccgcgtctatcagagtttggcgaatctcattcgctggtctgaccaggtgatgctagag
ggcatcgacctcgacgacaaggacactgtgacgaccgtcaccacggtgatcaaagctgtg
ctggatggtgtgaaggagctggtgaaactcactattgagaaacaggagcaaccgtccccg
acgtcccccaacaaaccagcgcctcctgtgaccaaacctgagagtgtgtgtgaaaatccc
cttaccgaacgagagaaggcgatccttagtaagaccacgcccattgtcacacccactgac
agcttgactgacatgtcagaggaggaggttgccccgcccaaacctcctctaccaggcgtt
aaactggcagagcacaggaaaaggatgcagttgtgctctgatcctgttgccgggcagcgg
agggccacagcgatggaaaccccgcccgctctgcctcccaagaagcgacagtcggcccca
tcccccacacgtgttgccgtggtagcgccgatgagtcgggtcccctgtggtctcaacctg
cctcctggagctctaagacagcagcaggagtttgacgtggatctcctccagaggcgtttc
tccggtgggagccagtcgtacggcggagattcacctcgtctttctccctgtaacagtatg
ggaaaactcagcaagtccgacgagcagctctcgtcattggagcgagacagcggccagtgc
tctcgcaacactagctgtgaaacactagagggatatgatcccgattacgacttcctgcat
caggatctatccgtagccgagcctttaccgtttccgacaggcggcagcagtctgagtcct
ctcccggaatgccacggagagtctcagtcgttaagccccgcccacccgcgtttcagtgct
cctgtcaccaatcaggcttccctggagtactggaccccacctggaccgaccaatagcgtg
cttccccccgccctcccgcagaagaagcggcggtcggcgccgattatatcagcgtaccct
ctttacgaacgcctcccgtcgcactatgataacctgtcagaagaggagcagccgacgccg
ccgttcccgctggtgactccggtgtcgccgcttccgcaggtcaacggaggagacgatctc
tcgcagtgtacggacgccgacagcccaccgccgttgccagagaagaagggcaaacagatc
cttcagtacatgcagtttgtggaggattactctgaacctcagccgtccgtcttctaccag
atgcctcagaatgagagtatttacgagcagcggaggaacaagcgctttcaggaggtttac
ggcttcaacgattcctacagcagctcggactccgtccatgagcccgtcccgccaccagca
ctgcctcccaaacagagacagctggcctcctacacttcttctcctccttcatcctcctct
tcctctttttcaatcctccctcctcctgctgggcttccggaggaggcggagcctgctctt
ggtctcagcctatcagtgtctagctccttcctcagtggccacacctctttgaccacacct
gtgagttccgacctggttggcttgaccaatgccggcaaagctctagatggtgggggtgtc
tctaacgggtccttgaccagctctctggtctctctggccgtctgtcttccttctgaatct
tctctttctgactcgcttcttacctccgcgagtgaaagtgttgatgaaggcggtgaggga
gagtatgtgaacctgtactcctccacacaggctaatggagaaaacacacaccgcactgac
ccctcatcatgtgatgacgtgcttcaagaccacacccctcacatacccacatccaatagc
aaggaagcattgtctaaggacaggccgaaggaacccagtcatagtcagatagatgatgtt
gatgaactgtccctcattgatcataatgatattatgaaccgcatcacactcaaagcagag
aatgatgatggtcctgatgtgagagccggctctggtgatatactgctagttcacgctaca
gaaacagatcgcaaagacttggtgttgtactgtgaggcttttctcaccacctacagaacc
ttcataacgcctgaagacctcattaagaaactacactacagatatactcggttttgtcac
agcccagacactttcaagaagcgtgtcagtaaaaacactttcttcgtgctggtgcgagtc
gtggatgaactctgtctggtggagttgaccgaggacatcctgcggcagttaatggatctg
gttttccgtctggtgtgcaatggagaactgagtctggcgcgggtgctgcgaaaaaacatc
ctcgataaagtggaacaaaagaggctcctgcgacacatgcacatgctcaaacctctggcc
gcacggggcgtctccgccaggcccggcacgctgcatgatttccgcagtcatgagatcgcc
gatcagctgacgttgctggatgcagaactgttttacaagattgagattcccgaggtgctg
ctttgggcaaaagaacagaatgaagagaaaagtccaaatctgacgcagtttacggagcac
tttaacaacatgagctactgggtgcgctctatcatcatccagcaggagaaagctcaggac
agagagaaacttctgctcaaatttattaaaatcatgaagcacttgcggaaactgaataac
ttcaactcttatttggcgattctctcggcgctggactctgcaccaatcagacgactggaa
tggcagaaacagacgtctgagggtttggaggagtactgcactttgattgacagttcgtcg
tctttcagagcatacagagcggccctagcagaagtggagcctccatgtataccatacctg
ggtttgatcctacaggacttgacgttcgttcatctcggaaacccagattttatcgacggt
aaagtgaatttctccaagcgctggcagcagttcaacattctggacagcatgagacgcttc
cagcaagtacactacgaactgaaacggaatgaagacatcgtctcgttcttcaacgacttc
agcgatcacctggcggaggaggcgttatgggagctctcgctcaagatcaaaccacgaaac
atctcgcggcgcagaacggagcgtgaggaaaagacctag
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