Garra rufa (doctor fish): 141292379
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Entry
141292379 CDS
T11039
Name
(RefSeq) nuclear factor related to kappa-B-binding protein-like
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141292379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141292379
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
141292379
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
141292379
NCBI-ProteinID:
XP_073680489
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All DBs
Position
19:21175926..21195315
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AA seq
1294 aa
AA seq
DB search
MDALDHMLTDPLESGMDQDGRVMEECMLGNCRVRVPEDLLEDPEIFFSALSESTWTDVLT
DAQRTHLRQLLPQFSENNISEQNSIISDLFNNQNFFFGNPLHIAQKLFRDGYFNPEVVKY
RQLCAKSQKKRHVYSLQQYYHKLLKQILVSRKELLDLAVRSGPELAVKRRYPAPSHKEML
EQRVRRRVGHILKDVKTECGDSNVSSDEDDTASWLPVPQSPSSPTPTVSLRVLPSLSTQD
MKTRDKPEMGEKELRAMLHRHREKRKRQPDHPDLMTSDLHLGDIMSRVNIGRKGSVTTVF
DLALPKKKIKEERRKKKMRPIKMESEEVCDVQMSAPSVNSGLADVPIAPPQSVKEEPMDE
SQRSPDTVEEIAMSFFHLLEDVLRLESLATSSVMEEKVQQWQSSPASTLNPWFSMAPCWS
ELAVPALQFLAGESKAGVMALPTGFVPFVEFKELSQQWKWIGPSQEGDKDLSALCQLWLE
SKDHVIVKQEGEEAAELTPPTPRVWTDYVVRPSTGEERHVFQEQEQQRYDQPHKAFTYRM
HGFESVVGPVKGVFDKETSLNKAREHSLLRSDRPAYVTILSLVRDAAARLPNGEGTRAEI
CELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRDRSQEEFE
RIHQAQAAAAKAKKALQQKPKPAPKPKAGGKEPGSKNGAAEAGQSSGSEGVAIAAASLAQ
PPTTPTPSTPGTPKSPLPPTAATPTKIGAPEPVKTNPSVLLVSPPSMPQLGTLLSASQPS
PQVSQQASPQPATRVVAHSAATGSLPQVRVVTAQPGLQTSSAGQAATLVHQSPHHIRVPV
TVAHGKNITQAVVTLPLRGQSAGSPIQVQASRGQASLTVPGLASAVTVTKPQTSSPASPA
HNPTSPAVLQGVSSQNIIKQVAITGQLGVKTQSGAGIPLTATNLRIQGKDVLRLPPSSIT
TDAKGQTVLRITPDMMATLTKSPVATVKLTPDMLSSATSSGSKSISATLHVSQPQPSPPA
SSTAVSVTAENLAAKAPATLVKVHPELKAACDTAIRLMPALAVTMADSKARTFSTVTSSD
SKAGTTIRIVPNLGVIPQKQGQTVSISTTSTSTKPVTVSSGAATVTIATSGVGGAKGVTL
GPAGTGSTLSLGTAAATVRQVPVTATVVATQAGKLPTRITVPLSVLSQPLKNKSVVTTPI
LKGNISTNISNLGRNIILTTMPAGTKLIAGNKPVSFVTAQQLQQLQQQGQATQVRIQTVP
AQQLQRTAASSPKSTVSTVVVSTAPSPKTNPDPQ
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggatgcattagatcacatgttaacagacccactggagtctggaatggaccaggatgga
cgtgtgatggaggagtgcatgttgggaaactgtagagtacgggttcctgaagatttgctg
gaggacccagagatattcttctcagccttgagtgagagcacatggacagatgtgctcaca
gatgctcagcgcacacatctacgtcaactcctgcctcagttctccgagaataacatttcc
gaacagaacagcatcatcagtgaccttttcaacaaccagaatttcttcttcggaaacccc
ttgcacattgcccagaagctgttcagagatggttactttaacccagaggtggtcaagtac
agacaactttgtgccaaatcgcagaaaaaaaggcacgtctactcacttcaacagtactac
cacaaactactcaagcagatcctggtttctagaaaggaattgttggatttggcagttcgc
agtggacctgagcttgctgtaaaacggcggtaccctgccccgtctcataaagagatgctg
gagcagagagtgagacgtcgagtgggtcatatactaaaggatgtgaaaacagagtgtggg
gacagtaatgtgtcatctgatgaagatgatacagcctcttggttgcctgttcctcagtcg
ccctcctccccaactccaactgtctctctcagggtgcttcccagcctttctactcaggac
atgaaaaccagagacaagcctgagatgggtgagaaggagctaagagccatgctgcacagg
cacagagagaaaagaaaacgacagccagaccaccctgacctgatgacctctgacctccat
cttggtgatatcatgtcacgagtcaacatcggcagaaaaggatctgttacaactgtcttt
gacctggctttacctaagaagaaaataaaggaagagaggaggaagaaaaagatgcggcct
ataaaaatggaatcggaggaggtctgcgatgttcagatgtcagcaccttctgtgaactcg
ggtcttgctgatgtccccattgctcctccacaaagcgttaaagaagagcccatggatgag
tcccagaggagccctgacacagtggaagagatagccatgagcttttttcatttgctggag
gacgtcctcagactggaaagtctagcaacatcctccgtgatggaggagaaagtccaacag
tggcagtcatctccagccagcacactcaacccctggttctctatggccccctgctggtca
gagttggcagtgcccgctctacagtttctcgctggagagagcaaagctggtgtaatggct
ctgcctacaggctttgtaccttttgtggagttcaaggaactttcccagcaatggaagtgg
ataggtccaagtcaggagggagacaaagatctaagtgccctgtgccagttatggctggag
tcaaaggatcatgtgattgtcaagcaagagggagaagaagctgcagagctcactcctcca
acacccagagtgtggactgactacgtggtgaggcctagtacaggagaggaaaggcatgtt
tttcaagagcaggagcagcagcgttatgatcaaccgcataaagcctttacttaccgaatg
cacggctttgagtctgtggtgggaccagtcaagggagtttttgacaaggagacttcgctc
aataaagcacgagagcattctctactgcgctccgacagaccggcctatgtcaccatacta
tctcttgtgcgagatgctgctgccaggcttcctaatggagaaggcactagagctgaaatc
tgtgagctactcaaagactcccagttcttagcccctgatgtcaccagtgctcaggtaaac
acagtggtgagcggtgccctcgaccgcctgcactacgaaaaagacccttgcgtgaaatac
gacatcggccgcaagctgtggatctacctccacagagaccggagccaggaggagtttgag
cgaatacaccaggcccaggctgcagctgccaaagccaagaaagctctgcagcagaagccc
aaaccagcacccaaacctaaggcaggtggcaaggaaccaggaagtaagaacggtgctgca
gaggctggtcagagctcagggagtgaaggagtagccattgcagctgccagtctggctcaa
cctcccactacccccacaccaagcacacccggaacccctaaatcaccacttcctcccaca
gcagctactccaaccaaaataggcgccccagaacctgtcaaaaccaatcccagtgtcctg
ttggtgtctcctccttccatgcctcagttaggaacgctgctatctgccagtcagcctagt
ccacaggtttcccagcaggcctctccgcagcctgcgactcgggtagtggcgcactcagct
gccactggttctctgcctcaggtgcgagtggtcaccgcccagcccggtcttcagacgtcc
tctgcgggacaagcagccacgttggtgcatcagagccctcaccacatcagggtgccggtc
actgtggcccatggaaagaacattacacaggcggtggtgactctaccactaagaggccag
tctgcaggaagtcccattcaggtgcaggcttcacggggccaggccagtcttactgttcca
ggtcttgcctctgcggttacagtaaccaaacctcagactagctcacccgccagcccggca
cacaacccaacttcacctgcagtgttgcagggtgtcagcagccagaatattatcaaacag
gttgcaatcactggtcagttaggtgtaaagacccaaagcggggcagggatccctctcact
gccactaacctccgcattcaggggaaggatgtcctccgcttacctccctcctcaattacg
accgacgccaaaggtcaaacggtacttcgcatcaccccagacatgatggccaccctcact
aaatctccagtggccactgtcaaactcactccagacatgctgagcagtgctacaagctca
ggcagcaagagcatctctgctacactacacgtgtctcaacctcagccctcacctcctgcc
tctagcaccgctgtatccgtgacagctgagaacctggctgctaaagcaccggccacccta
gtaaaggttcacccggagctgaaggctgcctgtgacaccgccatccgcctcatgcccgcc
ttggccgtcactatggctgattccaaggcccgtacattctcaaccgtcacctcgtccgac
tcgaaagcgggcaccactattcgaatagtgccaaaccttggggtaatccctcagaaacaa
ggtcagactgtctcaatcagcacaaccagcacaagtacaaagcctgtcacggtttcatca
ggggcagccactgttaccatagccaccagtggagtgggaggggccaaaggcgtgacgctg
ggccctgcaggcacaggatcaacgctttctttgggcactgctgcggccacagtcagacag
gtgcccgtcactgctactgttgtagccacacaagctgggaaacttcccacaaggatcaca
gtgcctctatctgtcctcagccaacccttgaaaaataagagtgtggttactactcccata
cttaaagggaacataagcactaatatcagcaacctggggaggaacattatcctgactacc
atgccggcaggcaccaagttgattgctgggaacaagcctgtcagctttgtgactgctcaa
cagctgcagcagctacagcagcagggacaagccacacaggttcgaatacagacggtaccg
gcgcagcagctacagcgcacagccgccagctctccgaaatccacagtgtcgacggtggtg
gtctctacagcaccctcgccgaagacaaacccagatcctcagtga
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