KEGG   Garra rufa (doctor fish): 141292504
Entry
141292504         CDS       T11039                                 
Symbol
cul5b
Name
(RefSeq) cullin-5 isoform X1
  KO
K10612  cullin 5
Organism
grf  Garra rufa (doctor fish)
Pathway
grf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:grf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    141292504 (cul5b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:grf04121]
    141292504 (cul5b)
   03400 DNA repair and recombination proteins [BR:grf03400]
    141292504 (cul5b)
Ubiquitin system [BR:grf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul5 complex
    Cullin
     141292504 (cul5b)
DNA repair and recombination proteins [BR:grf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     141292504 (cul5b)
SSDB
Motif
Pfam: Cullin Cullin_AB Cullin_Nedd8
Other DBs
NCBI-GeneID: 141292504
NCBI-ProteinID: XP_073680626
LinkDB
Position
19:complement(24080287..24097037)
AA seq 795 aa
MATSNLLKNKGSLQFEDKWDLMRPIVLKLLRQETVTKQQWFDLFSDVHAVCLWDDKGPAK
IHQALKEDILDFIKQAQARVLSHQDDTALLKAYIVEWRKFFTQCDILPKPFCKLEITLLG
NQGSNKKSNVEDSIVRKLMLDTWNESIFCNIKNRLQDSAMKLVHAERLGEAFDSQLVIGV
RESYVNLCSNADDKLQIYRENFEKAYLDSTERFYKTQAPSYLQQNGVQNYMKYADGKLRE
EEKRALRYLETRRECNSVQALMECCVNALVTSFKETILAECPGMIKRNETESEYGRSSGT
KGSASSELHLMFSLMDKVPNGIEPMLKDLEDHIMSAGLADMVASAETITTDSEKYVEQLL
TLFNRFSKLVKDAFQDDPRFLTSRDKAYKAVVNDATIFKLELPLKQKGVGLKTQPESKCP
ELLANYCDMLLRKTPLSKKLTSEEIEAKLKEVLLVLKYVQNKDVFMRYHKAHLTRRLILD
ISADSEIEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQSFKEMHKHNKLALPADS
VNIKILNAGAWSRSSEKVFVSLPTELEDLIPEVEEFYKKNHSGRKLHWHHLMSNGIITFK
NEVGQYDLEVTTFQLAVLFAWNQRPRERISFENLKLATELPDAELRRTLWSLVAFPKLKR
QVLSYEPVVGSPKDFAEGTVFYINQEFSLIKNSKVQKRGKINLIGRLQLTTERMREEENE
GIVQLRILRTQEAIIQIMKMRKRISNAQLQTELVEILKNMFLPQKKMIKEQIEWLIEHKY
IKRDETDINTFIYMA
NT seq 2388 nt   +upstreamnt  +downstreamnt
atggcgacgtctaatttattgaagaataaaggctccctgcagtttgaagacaaatgggat
ttgatgcggcccattgttttgaagttactccgtcaggagacagttactaagcagcagtgg
ttcgatttgttctcagacgtccatgcggtgtgtttatgggacgacaaaggcccagcaaag
attcaccaggcactgaaagaagacatccttgattttatcaagcaagcacaggcgcgagta
ctcagtcatcaggatgacacagcattgcttaaagcttacatcgtggagtggaggaagttc
ttcacccagtgtgatattctacctaaacccttctgcaagttggaaatcaccctgctgggc
aaccaggggagcaataagaagtccaatgttgaagacagtattgttagaaagcttatgctt
gacacatggaatgagtctatattctgtaatataaagaaccggctccaggacagtgccatg
aaactggtccatgctgagagattaggagaagcgttcgactcgcagcttgtcattggagtg
cgggagtcatatgtgaatttgtgttccaacgctgatgacaagctccagatctatagagag
aattttgaaaaggcgtatctggattccaccgagaggttctacaagacacaagcaccttcc
tatctgcaacagaacggcgttcagaattatatgaaatatgcagatggcaagttacgagaa
gaggagaagcgtgcacttcgatatctggaaaccagacgtgaatgtaactccgtccaggca
ctaatggagtgttgtgtgaatgcgctggtgacatctttcaaagaaacaatcctggccgag
tgtccaggaatgatcaagcggaacgagacagagagtgagtacggcaggagctctggcacc
aaaggctcagcaagttcagagctgcaccttatgttctcgctgatggacaaagtgcccaat
gggattgagcctatgctaaaggacctggaggatcatatcatgagcgcaggtctggctgat
atggtggcatcagcggaaaccattaccacagactctgaaaaatatgttgagcagcttcta
acattgtttaaccgctttagtaaattagttaaggacgcattccaagatgatccacgtttc
ctaacatccagggataaagcatacaaagcagtagtgaatgacgccacaatatttaaacta
gagctccctctaaaacagaaaggtgtgggtctgaaaacacaaccagagtccaaatgtcca
gagctgctggccaactactgtgatatgctccttagaaagaccccactgagcaagaaactc
acctcagaggagatagaggccaagctgaaggaagtgctcctggttctaaagtatgttcaa
aacaaagatgtcttcatgaggtaccacaaagcgcacttgacccgcaggcttattcttgac
atttctgcagacagtgagattgaagaaaacatggtggagtggctcagggaggttggcatg
ccagcagattacgtgaacaagcttgccagaatgttccaagacatcaaagtatcagaagac
ttaaatcaatccttcaaagaaatgcacaaacacaacaaacttgcattgccagctgactcc
gtcaatataaagatattgaatgcaggagcatggtctcgaagttcagagaaagtgtttgta
tccctgcccaccgaactagaagatctcattcctgaagtcgaggagttttacaagaaaaat
cacagtggcagaaaattacactggcaccatttgatgtccaatggcattatcacatttaag
aatgaagttgggcagtatgatttagaagtcacgacattccagttagctgtgttgtttgcc
tggaaccagaggcccagagagaggatcagctttgagaatctgaaactagccacggagctt
ccagacgctgagctgcggcggaccctctggtctcttgtagctttccccaaactaaagcgt
caagtgctgtcgtatgaacctgtggtgggctctcctaaagactttgcagaaggcactgtg
ttttacatcaatcaggagttttctttaataaaaaactcaaaggtccaaaaaagagggaag
atcaatttgattggtcgattacaactcaccacagagagaatgcgtgaagaagagaacgag
ggcatagtgcaacttaggatattacgcacacaggaagctatcattcagatcatgaagatg
aggaagaggatcagcaacgcacagcttcagacggagcttgtggaaatcctaaaaaacatg
ttcctgccccagaaaaagatgatcaaagagcaaattgagtggctgatagaacacaaatac
atcaagcgggacgagacggacattaacacatttatctacatggcgtag

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