Garra rufa (doctor fish): 141292568
Help
Entry
141292568 CDS
T11039
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
grf03021
]
141292568 (supt6h)
03036 Chromosome and associated proteins [BR:
grf03036
]
141292568 (supt6h)
Transcription machinery [BR:
grf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
141292568 (supt6h)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
141292568 (supt6h)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_N
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
141292568
NCBI-ProteinID:
XP_073680701
LinkDB
All DBs
Position
19:complement(20524700..20549143)
Genome browser
AA seq
1721 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQRFMEDDEEEEEENTEDQDEHGNLRGLIDDGDVE
EEEEEPRSAPEDSDSGEEVRHRRRKRSYDDYLDDDDLDLIEENLGVKVKRRKKKYSRVKT
MDDEGEDDEKDMIADEIFTGDGDGEGEVEEGEAVDTLHQREDEEEEDDEESDIDDFIVDD
DGQPITKKKGKKFSGYTDAALQEAQEIFGGDFDFAEFDTEAYDHAEEEEEDQDDESWDRP
KKQTKRRVGRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRAIPVKPAEDDELEE
EAEWIYRNAFSTPTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQHFEVPFI
AFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQRMQSYQFEQISADPDKPL
ADSTRPLDTTDMERLKDVQSLDELGDVYNHFLLYYGRDIPKMQNATKATKKKLKKIKEVS
EEDGEEVEVEEEEEEEEQKGPDLKQASRRDMYSICQSAGLDGLAKKFGLTPEQFGENLRD
SYQRHETEQFPAEPLELAKDYVCSQFSTPEAVLEGARYMVAMQIAREPLVRHVLRQTFQE
RAKINIKPTKKGKKDVDEAHYAYSFKYLKNKPVKELSGDQFLKMCLAEEEGLLAIDICID
LVGVKGYGDQTYFDEIKQFYYRDEFSHQVQEWNKQRTLAIERSLQQFLYPQMAKELKNKL
VAEAKDNIVKSCCKKLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAFASGRDTP
VFCSLINGEGEVVDFLRLPYFLKRRNAWREDEREKKLQDIENLKKFLLSKKPHVVAVAGE
NRDAHMVMEDIKRTISELEQDSSLPVVGVEQVDNELAVLYMNSKKSEADFRDYPPLLRQA
VSVARKIQDPLVEFAQVCSSDEDILCLKLHPLQEHVVKEELLGALYCEFINRVNEVGVDV
NRAIAHPYTQSLVQYICGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFINCAG
FIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEEIL
ENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRPPNTEEVFNML
TKETPETFYIGKLITCVVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQDNFPELSEVW
NHFDSGSCPGQAIGVRTRLDNAVTGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKIDIE
KFNVDLTCRTSDLGDKNNEWKLPKDTYYDFDAETDDVKQEEEQKKKQQRTTYIKRVIAHP
SFHNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENAFS
LGHTLWINTEEFEDLDEITARYVQPMAAFARDLLSHKYFHECNGGDRKKMEELLVRSKKE
KPTFIPYYVSACRDLPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQIFPTVNGLFRWFKD
HYQDPVPGVTPTSSRTRTPASVNATPANINIADLTRAVNALPRNMTSQMFNAIAAVTGQG
QNPNTTPAQWASSQYGYSGGSSAGGGGSSSAYHVFATPQQPIATPMMTPSYSYTTPGQQQ
AMTTPQYPSSTPQSSHGHHQHSSSTPSSSSSRVRTPQPKTSSHTAVDWGKMAEQWLQEKE
AERRKQKTPRMTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcatcgagagcgaggctgaggagtcagaggaggagtttgaggagaaagac
ctgaagcccaagaagacgcagagatttatggaagatgatgaagaagaggaagaagagaat
actgaagatcaggatgagcatggaaacctgagaggactcattgatgatggcgatgtggaa
gaagaagaagaagaaccgcgaagtgcaccagaggacagtgactctggtgaagaggtccgt
catcgtcgcaggaaacgaagttacgatgactatctggatgatgatgatctggacctcatt
gaggagaatttaggagtgaaagtaaagagaaggaaaaagaagtactcgcgtgtgaagacc
atggatgatgagggggaagatgatgagaaagacatgatcgctgatgagatcttcactggg
gatggtgatggagaaggagaggtggaggaaggagaggctgtggacacccttcaccaaaga
gaggatgaagaggaggaagatgatgaggaatcggatattgatgatttcattgtggatgat
gatggacagcccatcactaaaaagaagggaaagaaattctctggctacactgatgctgct
ttgcaagaagctcaagagattttcggtggagattttgactttgctgagtttgacactgag
gcgtatgatcatgcggaagaggaagaggaggatcaggatgatgagtcatgggatcggcca
aagaagcagaccaagagaagagttggccgccgtagcatatttgagatctatgagcccagt
gagctggagagcagccacatgaccgatcaagacaatgagatccgctctacagacatgcca
gaaagattccagttgagggccatccctgtaaaacctgctgaggatgatgaacttgaggaa
gaagctgaatggatttacaggaatgctttctccacaccaaccatttccatgcaggagagc
acagactacctggatcgtgggacaaccactaattttagcaggaagggccccagtactatt
gcaaaaatcaaagaagctctaaacttcatgaggaaccaacactttgaggttcccttcatt
gcgttctacaggaaggagtatgtggaaccagagctgaacattaatgatctgtggaaggtg
tggcagtgggatgagaagtggactcagctaaagaccagaaaacagaacctgacacgtctc
ttccagaggatgcagtcttatcagtttgagcagatctcagctgatcctgacaagccattg
gctgactcgactcgtcctctagacactactgatatggagagactgaaagatgtccagtct
cttgatgagctgggagacgtctacaaccacttcctgctctactatggccgagacattcct
aagatgcaaaatgcaaccaaggccaccaaaaagaaactaaagaagatcaaggaagtgtca
gaggaagatggagaagaagtagaagtggaggaggaagaggaagaagaggagcaaaagggt
ccagatctgaaacaagcttcccgtagagatatgtacagcatctgtcagagcgcaggcctt
gatggtcttgccaagaagtttggtctgaccccagagcagtttggagaaaacttgcgagac
agttatcagaggcacgaaaccgagcagttcccagcagagcctttggagctggccaaggac
tatgtatgcagtcaatttagcaccccggaagctgttctggaaggcgcccgttacatggtg
gccatgcagattgctcgtgaacctctggtcagacacgtgctcagacagaccttccaggaa
agggctaagattaacatcaagccgacgaagaagggcaagaaggatgtggatgaagcacat
tatgcctattcctttaagtacctgaagaacaagcctgtgaaagagctgagtggagatcag
tttttgaagatgtgcctggctgaggaggaaggcctgctcgccatcgacatctgcattgac
cttgtgggagtcaaagggtacggagatcagacctactttgatgagattaagcagttctac
tacagggatgagttcagtcaccaggtgcaggaatggaacaagcagagaactcttgcaatt
gaacgctccttgcagcagttcctgtatcctcagatggccaaggagctaaaaaacaagctt
gttgctgaagctaaggacaatattgttaagtcttgctgcaagaagctgtataactggttg
aaggtggctccttatcggcctgatcagcaggtagaggaagatgatgaccttatggatgaa
tcgcaaggaaagggtatccgtgtactcggggtggcatttgcttctggcagagacacacca
gtgttctgctccctcattaatggtgaaggagaggttgtggacttccttaggcttccttat
ttcctgaagaggagaaatgcatggagagaggatgaaagagagaaaaagcttcaggatatt
gaaaacctcaagaaattcctccttagtaagaagccacatgttgttgctgttgctggggag
aatcgtgatgctcatatggtgatggaggacatcaagcgcaccatcagtgagctggagcag
gactcctctctgcctgtggtgggagtggagcaggtggataatgagctggctgtgctttat
atgaacagcaagaagtctgaggcggacttcagggactatccacctctgcttcggcaggct
gtgtctgtggctcgcaagattcaggaccctctagtggagtttgcccaagtctgcagcagt
gatgaggacatcctgtgtttgaaactgcatcccctgcaggagcatgtagtgaaagaggag
ctgctgggtgctctttactgcgagttcataaaccgggtgaatgaggttggtgtggatgta
aaccgggctattgctcatccttacacccagagcctagtccagtacatctgtggccttgga
cctagaaaaggctcacacctgctcaagattcttaaacagaacaacactaggttagagaac
cgaacccagttggtcaccatgtgccatatgggacccaaagtcttcatcaactgtgctggc
ttcatcaagatcgacaccgcctctcttggagacagcactgactcctatattgaggtcctg
gacggttctcgagtacatccggaaacgtacgagtgggcacgtaaaatggcagtggatgct
cttgagtacgacgagtcggcagaagatgccaacccagccggagcgcttgaagagattctt
gagaacccagaaaggctgaaagacctggatctggatgccttcgctgaggagctggagaga
cagggttatggtaataagggaattacactgtacgacatccgagctgagctcagctgtaga
tataaagatttgagagccccgtacagacctcctaacactgaagaggtctttaacatgctc
accaaggagacgcctgagaccttctatattggtaaactgatcacctgtgtggtgactggc
attgctcacagacggccacaaggtgagagttacgaccaggctatccgtaatgatgagacg
ggtctctggcagtgtccattttgccagcaggacaacttccctgagctcagtgaggtgtgg
aatcactttgacagcggctcatgccctggtcaagccattggagtaagaaccaggttagat
aatgctgtcacaggctttatcccgacaaagtttcttagtgacaaggtggtgaagcaccct
gaggaaagagtcaaggttggcatgactgtacactgccgcatcatgaagattgacattgag
aagttcaacgtggatctcacttgtagaacatctgacctgggtgacaagaacaacgaatgg
aagcttcccaaagatacctactatgatttcgatgctgagacagatgatgtgaaacaggaa
gaagagcaaaagaagaaacagcagagaaccacttatattaagcgagtgatcgctcacccg
tccttccacaacatcaacttcaagcaagcagagaagatgatggaatccatggaccaaggt
gatgtggtaattcgacccagcagtaaaggggagaaccacctgacggttacatggaaggtg
gctgatgggatctatcagcacgtggacgtccgtgaggagggtaaagaaaatgcattcagc
cttggacatactctttggatcaacactgaggagtttgaggatctggatgaaatcacagcc
aggtatgtccagcccatggctgcgttcgcacgagatctgctcagccacaagtatttccac
gagtgcaatggaggtgataggaagaaaatggaggagcttctcgtaaggtccaaaaaagag
aagccgacattcatcccttactacgtttcagcttgtagagacctgccaggcaaatttctg
ctgggctaccagcctagagggaagccaaggatagagtatgtaaccatcactccagatggc
tttaggtatcgctctcagatattcccaacagtcaatggtctcttccgctggttcaaggac
cactaccaggatcctgtaccaggcgtcacaccaaccagcagcagaacaagaacaccagca
tcagtgaacgccacacctgccaacatcaacattgctgacttgactcgagcggtcaacgct
ctcccacgaaacatgacatcccagatgttcaacgccattgccgcggttacaggtcaaggc
caaaatcccaacacgacgccggcccagtgggcctccagtcagtatggttacagcggtggc
agcagtgctggtggtggcggcagcagcagcgcttatcacgtatttgcaacaccccagcag
ccaattgcgacacccatgatgacgcccagttactcttacaccacacctggccagcagcag
gccatgaccacgccgcagtatcccagcagcaccccgcagtcctcacacggacaccatcag
cattcgtcctccacgccatcatcctcgtcatcgagagtgcggacaccacagcccaagaca
agttcccacactgccgtggactggggtaagatggctgaacagtggctgcaggagaaagaa
gccgagcggcggaagcaaaagacgccccgcatgacgcccagaccttcccccagccccatg
atcgagagcacgcccatgtccatcgccggagacgccactcccctcctggacgagatggac
cgatag
DBGET
integrated database retrieval system
