Garra rufa (doctor fish): 141292586
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Entry
141292586 CDS
T11039
Symbol
skp2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
grf Garra rufa (doctor fish)
Pathway
grf04068
FoxO signaling pathway
grf04110
Cell cycle
grf04120
Ubiquitin mediated proteolysis
grf04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
141292586 (skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
141292586 (skp2)
04150 mTOR signaling pathway
141292586 (skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
141292586 (skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141292586 (skp2)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
141292586 (skp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_NXF1-5
LRR_R13L1-DRL21
WC-rich
Integrase_Zn
DUF3708
Motif
Other DBs
NCBI-GeneID:
141292586
NCBI-ProteinID:
XP_073680722
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Position
19:23914889..23924206
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AA seq
410 aa
AA seq
DB search
MSNERAFQELSENLEGSLCRPQRGKWKRRPSCSGGLDTENTPNELIQQWSPPHKKILTSA
KGKENEENVFVLARRPRKRKESAVGLCWDSLPDELLLGILSRLSLQDLLRTLRVCKRWHR
LAFDESLWQSVDLVGKAQLDAELGQVLSAGALRLRCPHTCIGQPSFKSAQKLRVQHLDLS
NCTVETSVLEDILSRSRHLQNLSLEGLVLSDSIIYSLAQNTEIVRLNLCGCSGFSPESLA
EMLKSCTRIEEMNVSWCDFNNLHVQAIANNIPSSITQLNISGYRQNLTMEDVKAIVKRCP
NLTNLDLSDSVLVTTDCFPVLQELSTLKHLGLSRCYQIHPASLIDFEKFLNLQTLEVFGL
IQDSYLPILCKGLPHIQINTQPFSTVARPTSASRKDRTLWGMHCRLVYKH
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgaaagagcgtttcaagaactgagtgagaatttggagggatccctgtgcagg
cctcagaggggtaaatggaaaaggcggccctcctgcagtgggggtctagacactgaaaac
acaccaaacgagctcatccagcagtggtcacccccacacaaaaagatcctgacttctgca
aaaggaaaagaaaatgaggaaaacgtgtttgttcttgccagacggcccaggaaaagaaaa
gaatcagcagtaggcttgtgttgggacagtctacctgatgagctgttgctgggaatcctg
tctcgtctctcactgcaagatctcctccggacgttacgggtctgcaagcgctggcatcgt
ttagcgtttgatgagtctttgtggcaaagtgtggacctagtgggaaaggctcagttagat
gcggagcttggtcaggttctctcagctggagcgttgaggctgcgctgtccacacacctgc
atcggtcaacccagttttaaaagtgcacagaaacttcgtgtccagcatctggatttatca
aactgcacagtggagacgtctgttctcgaagacatcctgtctcgcagcagacatctacag
aatctcagtcttgaaggattggtgctctctgatagcattatttattctctggctcaaaat
actgaaattgtccgactgaatttgtgtggctgttcaggcttctcccctgaatcgttggct
gagatgctgaaatcttgtactcgaatcgaagaaatgaacgtgtcatggtgtgacttcaat
aatctccatgtgcaagctattgctaacaacattccctccagcatcactcagctgaacatc
agtggttacagacaaaacctcactatggaagatgttaaagctatagtaaaaagatgtcca
aaccttacaaatctagatttgagtgacagcgtgcttgtgacgacagactgtttcccggtc
ctacaggaactttccaccttgaaacatctggggctgagccgctgttatcagatccaccca
gcttctctcattgactttgaaaagtttctaaatctgcagaccctggaggtcttcgggctc
atacaggacagctacctgcccattctttgtaaaggtctaccgcacatacagatcaacacg
cagccgttctccactgtggcacgtcccacctcggcatcaagaaaggatcgcacgctttgg
ggaatgcactgccgactcgtgtacaaacattga
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