Garra rufa (doctor fish): 141292654
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Entry
141292654 CDS
T11039
Name
(RefSeq) small ribosomal subunit protein RACK1-like
KO
K14753
guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
141292654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
grf03019
]
141292654
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141292654
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
141292654
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
141292654
Exosomal proteins of colorectal cancer cells
141292654
Exosomal proteins of bladder cancer cells
141292654
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_Gbeta
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
TRM82_WD
Beta-prop_EML
DSE1_N
Beta-prop_SCAP
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_VPS8
Beta-prop_DCAF12
ASA1
CFAP251_N
PAC11
Beta-prop_NOL10_N
Beta-prop_WDR41
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
eIF2A
Beta-prop_WDR75_2nd
Beta-prop_ACSF4
Beta-prop_pof12
Tricorn_2nd
Cytochrom_D1
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
141292654
NCBI-ProteinID:
XP_073680790
LinkDB
All DBs
Position
19:complement(39138135..39151042)
Genome browser
AA seq
317 aa
AA seq
DB search
MTEQMTVRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALR
GHSHFVSDVVISSDGQFALSGSWDATLRLWDLTTGTTTRQFVGHTKDVLSVAFSADNRQI
VSGSRDKTIKLWNTLGVCKYTIQDESHTEWVSCVRFSPNSSNPIIVSSGWDKMVKVWNLA
NCKLKTNHIGHSGFLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDVINALC
FSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVITTNSKAEPPQCTSLAWSADGQTLFA
GYTDNLIRVWQVTIGTR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacagatgaccgtgagagggaccctgaagggccacaatggctgggtgacccag
attgccacgactccgcagtttccggacatgattctgtccgcgtccagagataagaccatc
atcatgtggaaactgactcgcgatgagaccaactacggtattcctcagcgagccctgcgt
ggacactctcacttcgtgagcgatgtggtcatctcatcagatggtcagtttgctctgtca
ggatcatgggatgcgaccctgcgtctgtgggatcttaccactggaaccaccactcgtcag
tttgtgggccacaccaaagacgtgctgagtgttgccttctccgctgataaccggcagatc
gtgtctggatctcgggacaaaaccatcaagctgtggaacaccctgggtgtctgcaagtac
accattcaggatgagagtcacacagagtgggtttcctgcgtgcgtttctctcccaacagc
agtaaccccatcatcgtctcctccggctgggacaagatggtcaaggtgtggaatctggcc
aactgtaagctgaagaccaatcacattggacactctggattcttgaacaccgtcaccgtc
tcccctgatgggtccctctgtgcctctggtggaaaggatgggcaggccatgctctgggat
ctgaatgaaggcaagcatctgtacactctggacagcggtgacgtgatcaacgctctctgc
ttcagtcccaaccgatactggctgtgtgccgccactggaccgagcatcaagatctgggat
ctggagggaaagatcatcgttgatgagctgagacaggaagtcatcaccaccaacagcaaa
gctgagccgccccagtgcacctctctggcctggtctgctgatggacagactctctttgct
ggatacacagacaacctgatcagagtttggcaggtgaccatcggaacccgataa
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