Garra rufa (doctor fish): 141292658
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Entry
141292658 CDS
T11039
Symbol
srsf1b
Name
(RefSeq) serine/arginine-rich splicing factor 1B
KO
K12890
serine/arginine-rich splicing factor 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
grf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141292658 (srsf1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141292658 (srsf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141292658 (srsf1b)
Spliceosome [BR:
grf03041
]
Common components
Common spliceosomal components
SR proteins
141292658 (srsf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
PRP38_assoc
TP2
Motif
Other DBs
NCBI-GeneID:
141292658
NCBI-ProteinID:
XP_073680793
LinkDB
All DBs
Position
19:complement(7243898..7252892)
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AA seq
244 aa
AA seq
DB search
MSGGVIRGPAGNNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVEF
EDPRDAEDAVYGRDGYDYDGYRLRVEFPRSGRGGGRGGGGGGVGAPRGRYGPPSRRSEYR
VIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGTGVVEFVRKEDMTYAVRKLDNTKFRS
HEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRSNSRSRSYSPRRSRGSPRYSPRHSRS
RSRT
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcggtgtgattcgagggcctgcaggcaacaacgattgtcggatttacgtaggt
aacttacccccagatattcgcaccaaggacgtagaggatgtcttttataaatacggagcc
attcgggatatcgaccttaaaaacagaagaggaggtccgccgtttgcatttgtggagttc
gaggacccgagagatgcagaggatgctgtgtatggacgagatggctatgactatgatggc
tatcgtcttcgagtggagttcccaaggagtggcaggggaggtggaagaggtggaggtggt
ggtggagttggagctcctagaggcagatatggccctccatccaggcgttcagagtacagg
gtcatagtgtcaggacttcctcctagtggcagctggcaggaccttaaggatcacatgcgt
gaagcaggtgatgtatgttatgctgacgttttccgagatggcaccggggttgtggagttt
gtgcgcaaagaagacatgacctacgccgtgcgaaagctggataacactaagttccggtca
catgagggggagacggcttacattcgcgttaaggtggatggcccgcgcagccccagttac
gggcgctcgcgctctcgcagccgcagcaggagtcgcagccggagcaacagccgcagtcgc
agctactctccacgccgcagccgaggatcgccgcgttactcaccccgccacagccgctcc
cgttcccgcacctaa
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integrated database retrieval system
