Garra rufa (doctor fish): 141292807
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Entry
141292807 CDS
T11039
Symbol
hnf1bb
Name
(RefSeq) hepatocyte nuclear factor 1-beta-B isoform X1
KO
K08034
transcription factor 2, hepatocyte nuclear factor 1-beta
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141292807 (hnf1bb)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
141292807 (hnf1bb)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
HNF-1B_C
Homeodomain
Homeobox_KN
Telethonin
APP1_cat
Motif
Other DBs
NCBI-GeneID:
141292807
NCBI-ProteinID:
XP_073680969
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Position
19:complement(7174775..7192111)
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AA seq
540 aa
AA seq
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MFTDMVSKLTSLQQELLSALLDSGVTKDVLVQALEDLCPCPAEFGIKMEKPLSPASVNGG
SDSNDSKPVFLTLTSAQGKGGKLSGDEGSDDGDDFDTPPILRELQSLNTEEAAEQRAEVE
RMLSEDPWRVARTVKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPMKTAKRAALYTW
YVQKQREIDRQFDRVQGSDPSDSSSQDQVLFFFPEFNHTGLSSGAVGGSGGPIVEEGEPG
SKRMRRNRFKWGPASQEILYQAYERQKNPSKEEREALVEECNRAECVQRGVSPSKAHGLG
SNLVTEVRVYNWFANRRKEEAFRQKLAMDTYAPHSMNPLLSHPSSHTQHHHSSSDSKLRY
SQQGTSEVTSSTTISHHGSSQSVLQQVSPGSLDPCHGLLSTDTKMISVSGGVLPPVSTLT
NIHSLSQSSHHHQQAQSLIMSLAAQSLTSPQSQSVPVINSVSGLTTLQPMQFPQSTSLTQ
LTTAHISQQPFTQSHMYSPKQEAAQFSHPSRYATMDTSTITHLGSSKQVKHQFPCPLQAW
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtttactgacatggtgtccaagttgacatcgcttcagcaggagctcctgagcgccttg
ttggactcgggggtcactaaggatgtgctggtccaggcgctggaggatttatgtccgtgc
cctgccgaattcggaataaaaatggaaaaacccttgtccccggctagtgtcaacggtggt
agcgactctaatgactccaaaccggtgtttctgactctgaccagcgctcagggtaaaggg
ggtaaactgtccggcgatgaaggctcggatgacggggatgacttcgacacaccgccgatc
ttgcgggagctgcagtcgctcaacacggaggaagcggcggagcaacgcgcggaggtcgag
cgcatgctatctgaggacccgtggcgtgtggcgcgcactgtcaaaggctacatgcagcag
cacaatattcctcagcgcgaagtggtggacgtgacagggctcaaccagtctcacctgtcg
cagcacctgaataaaggtacaccgatgaagacggccaaacgagccgcgctttacacctgg
tatgtccagaaacagcgcgaaatcgacagacagttcgaccgtgttcagggctctgacccc
agtgactcaagcagtcaggatcaggtcctgttttttttcccagaattcaatcataccgga
ctcagttcgggggctgtgggaggttctggaggaccgatcgtagaagagggggagccaggc
tctaagagaatgaggcgaaaccgcttcaaatggggtcccgcatctcaggagatactctac
caggcctatgaacgacagaagaaccccagcaaagaagaaagagaagcgctggtagaggaa
tgcaacagggctgagtgtgtgcagaggggtgtgtcgccctctaaagctcacggacttgga
tctaacttggtcacggaggttcgtgtgtacaactggtttgctaatcggcgtaaggaggaa
gccttcagacagaagttggctatggatacgtatgcaccccacagcatgaaccccctgttg
tcccatccatcatcacatacccagcaccatcacagtagctcagattcaaaactcaggtac
agtcaacaaggaaccagtgaggtcacttcctccacgaccatcagtcaccatggtagcagc
cagtcagtattgcaacaggtgtctccgggtagtctggacccctgccacggcttgctatcg
acggataccaaaatgatctcagtctctggtggagttttgcctcctgtgagcactttgacc
aacattcatagtctgtctcagtcgtctcatcatcatcagcaagcacagagcctcattatg
agcctggctgctcaaagtctgacgtctcctcagtctcagagtgtgcccgtcatcaacagc
gtgtctggactcacaaccctgcagcccatgcagttccctcagagcaccagtctgacacag
ctgaccaccgctcacatctcccagcagcccttcacacaatcacacatgtactctcccaaa
caagaagctgcccagttttcccatccatcccgatacgcgaccatggacaccagcaccatc
acacacctgggctccagcaagcaggtcaaacatcagtttccttgtcctttgcaggcctgg
tga
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