Garra rufa (doctor fish): 141292982
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Entry
141292982 CDS
T11039
Symbol
pus1
Name
(RefSeq) pseudouridylate synthase 1 homolog
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
grf03016
]
141292982 (pus1)
Enzymes [BR:
grf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
141292982 (pus1)
Transfer RNA biogenesis [BR:
grf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
141292982 (pus1)
Prokaryotic type
141292982 (pus1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2680
Motif
Other DBs
NCBI-GeneID:
141292982
NCBI-ProteinID:
XP_073681133
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All DBs
Position
19:30054024..30059572
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AA seq
419 aa
AA seq
DB search
MLRSCRIIHILSRQTFIPALKNKGWPDSVLKSRGFCMSCKMTENSSDAQIKALKRPVDDT
HAETEHEDKKLKTDQDERKYPKKKVAMLMAYSGKGYYGMQRNAKNSQFRTIEDELVTALV
KAGCIPEGHGDEMKKMSFQRCARTDKGVSAAGQVVSLKVWMIDNILDKINSHLPPHIRIL
GYRRVTGGFNSKNNCDARTYSYMLPTVSFSPKDYNQEDTSFRVNSETLQKVNRLFSLYKG
THNFHNFTSQKGPRDPSAKRYITHMSCGEPFVRQEAEFAVITVRGQSFMMHQIRKMIGLV
IAVVKGYVDETVIERSWGEDKVDVPKAPGLGLVLERVHFDRYNKRFGGDGIHETLEWTEE
EEAIAAFKDKHIYPSIIETELNEKSMVNWMATLYIHDFEATASGNQERKDDDEDGNVSD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgctaaggtcctgtcggatcattcatattttatcccgtcaaacatttattccagctctc
aaaaacaaagggtggccagattctgttttaaaatcccgtgggttttgcatgtcctgcaag
atgactgagaattcatcagacgcccaaatcaaagccctgaaaagaccagtagatgataca
cacgctgaaactgagcatgaagacaaaaagcttaaaacagaccaggatgagaggaaatac
cctaagaagaaggtggccatgctaatggcatattcagggaaagggtattatgggatgcag
agaaatgcaaagaattctcagttccgaaccattgaggatgaactggtcactgctctcgtc
aaagcaggatgtattcctgagggccatggagatgaaatgaagaaaatgtctttccagcgg
tgtgcacgaacggataagggtgtttctgctgcgggtcaagttgtgtctctgaaggtgtgg
atgattgacaacatcctggacaaaattaattcacatctgccgcctcacataagaatttta
ggttacaggcgagtcacgggtggcttcaattccaaaaataactgcgatgccagaacatat
tcctacatgcttcccactgtgtctttctctccaaaggactataaccaggaggacacatca
ttccgtgtgaactcagagacccttcagaaagtcaaccggttgtttagcctgtacaaaggc
acccacaacttccacaacttcacttcgcaaaaaggtccccgggaccctagcgccaagcgc
tacatcacccacatgtcctgcggagagccgtttgtgagacaggaagctgagtttgccgtc
atcacagtacgaggccagagcttcatgatgcaccagatccggaagatgatcggtctcgtg
atcgccgtggttaaaggatacgtggatgaaacggtgatcgagaggagctggggagaggac
aaagttgacgttcccaaggctcccggactcgggttagtgctggaaagggtgcattttgac
cgctacaacaaacgctttggaggagatggcatccatgagactctggaatggactgaagaa
gaagaagccatcgctgcttttaaggacaagcacatttatcccagcatcatagagactgag
ctcaatgagaagtccatggtgaactggatggctacattgtatatccatgattttgaagcc
acggcctcaggaaaccaagagcgcaaagatgatgatgaagatggaaacgtgtctgactga
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