Garra rufa (doctor fish): 141293067
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Entry
141293067 CDS
T11039
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
grf Garra rufa (doctor fish)
Pathway
grf04210
Apoptosis
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
141293067 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141293067 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141293067 (sptan1)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
141293067 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
141293067 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
Motif
Other DBs
NCBI-GeneID:
141293067
NCBI-ProteinID:
XP_073681212
LinkDB
All DBs
Position
19:complement(31384973..31431614)
Genome browser
AA seq
2496 aa
AA seq
DB search
MDISGVKVLESADDIQERRQQVLDRYRRFKELSTVRRQKLEDSYRFQFFRRDADELEKWI
QEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAGAIIKLDETGNLMISESHFASETI
RTRLEELHRLWDLLLQKTKEKGVRLLQAQKLVQYLRECEDALDWISDKEAIATSEELGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQAAGKLTQESHPEGELILKKQEEVNAAWQRL
KGLAQQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVNTLGGEADRLQQTHPQNASQIHLKRDELITNWEQIRTLAAERHARLNDS
YRLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKSA
DEAGQALLNTGHYASEEVKEKLGILSEEKVSLLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
KEDVATRRDALLSRRNALHERAQFRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELVDGKHYASSEVSTRMDEVSSQW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDFGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQAKQFQEAGHFDADNIRKKQEALLARYEALKEPMAARKQKL
SDSLRLQQLFRDVEDEETWIREKEPIASSTNRGKDLIGVQNLLKKHQALQAEISGHEPRI
KAVTQKGEAMIDEGHFAGEDVKAKLQELHNRWDGLKGKAAQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALKEQAEACRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSSSRENLLNEQGSIALRQEQIDNQTVVTKEVCSVSVRMKQVEELYGTLQELG
EKRKDMLEKSCKKFMLFREANELQQWINEKESALTNEEVGSDLEQVEVLQKKFDDFQKDL
KANESRLRDINKVASELESEGLMAEEAPVVQAQQVEMLGSAPGKDEADAKGASPWKSVRL
AVQTTANFNTIKELNNRWRSLQQLAEDRSNMLGSAHEVQRFHRDADETKEWIEEKNQALN
TDNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTEL
NTAWSSLVGRADQRKEKLGNSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEAL
LERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALERERADLEKAWVQR
RMMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQ
EEKIAALQSFADQLISADHYAKPEIFNRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFS
RDVDEIEAWISEKLQTATDESYKDPTNIQSKHQKHQAFEAELHANADRIRGVIDTGNALI
QRGACAGSEDAVKARLNALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDFWLSEV
EALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMASNAFDTSQVKD
KRDAVNGRFVKIKSMAGGRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDYGRDLT
GVQNLRKKHKRLEAELGAHEPAIQSVLETGKKLSDDNTIGQEEIQQRLAQFVEHWKELKD
LAAARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHEAFET
DFTVHRDRVNDVCSNGDELIKKENHNVENIMAKMKALRGKVTELERAAAQRKSKLDENSA
FLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGITNIT
ALKDQLLAAKHVQSKAIEARHATLMKRWNQLLSNSAARKKKLLEAQEHFRKVEDLFLTFA
KKASAFNSWFENAEEDLTDPVRCNSLEEIRALRDAHDAFRSSLSSAEADFNQLAELDRQI
KSYQVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANAF
HQWLQETRTYLLDGIAYRRVIRVYQYEVDDDLSGRSCMVEESGTLESQLEATKRKHQEIR
AMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARN
TTGVTEEALKEFSMMFKHFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFESILD
IVDPNRDGNVSLQEYMAFMISRETENVKSSEEIESAFRALSAENKPYVTKEELYQNLSKE
QADYCISHMKPYLDSKGREIPSAFDFVEFTRSLFVN
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atggatatcagtggagttaaagtgctggagtcagctgatgacatccaggagcgccgacag
caggttctggaccggtaccgtcgcttcaaggagctgtctactgtgcgcagacagaaactc
gaagactcttaccggttccagttcttccgtcgagatgcagatgagcttgagaaatggatc
caagagaagctacagatcgcctctgatgagaactacaaggaccccagcaacctacaggga
aagctccagaaacatcaagcttttgaggcagaggtgcaggctaacgctggggccatcatc
aaactggacgagaccggcaatcttatgatatctgagagccactttgcatctgaaaccatt
cgaacccgtctagaggaacttcaccgtctgtgggacctccttctgcagaagactaaagag
aagggagtgcgtctcctgcaggcccagaaactggtgcagtacctccgtgagtgcgaggat
gccctggactggatcagtgacaaggaagctattgccacctcagaagagcttggccaggat
cttgagcatgtggaggttctgcagaagaagtttgaagagttccagacagacctggcagcc
cacgaggagcgtgtgaatgaggtgaaccaagcagccggtaagctaacccaggaaagtcat
cccgagggcgagctcatcctgaaaaagcaggaggaggtgaacgctgcctggcagaggctg
aagggattggctcagcagaggcagggcaagctgtttggagctgctgaggtgcagcgtttc
aaccgtgatgtggatgagacaatcagctggattaaagagaaggagcagctcatggcatct
gatgattttggtcgtgacctcgccagcgttcaagctttgcttcgaaaacacgaggggctg
gaaagagacttggcagccttggaggacaaggtaaacactcttggcggtgaggcagaccgt
ctgcagcagacacacccccagaatgcctctcagatccacctgaaaagagatgaactcatt
accaactgggagcagatccgtaccctggcagctgagcgacacgctcggctcaatgactcc
tacaggttgcagcgcttcactgcagattttcgtgacctgaccagctgggtgacggagatg
aaggctctaatcaatgcagatgagctggccaatgatgtggccggagctgaggccctgctt
gaccgccatcaggagcataagggcgagattgatgctcatgaggacagtttcaaatctgcc
gatgaggctgggcaggctctgctgaacaccggacattatgcttctgaggaagtcaaggaa
aagctgggcatcctgtctgaagagaaagtgtctcttctggagctgtgggagctacgcagg
cagcagtacgagcagtgcatggacctgcagctcttctacagagacactgagcaggtcgac
aactggatgagcaagcaagaggctttcctgctgaatgaagatctgggcgactctctggac
agcgttgaagctcttctgaagaaacacgaagactttgagaaatccctcagtgcccaggaa
gagaaaatcactgcactggatgaatttgccaccaaactgatccagaacaatcactatgcc
aaggaggatgtggccactcgcagagatgcactgctgagcagacgcaacgctcttcatgag
cgcgctcagtttcgccgtgctgccctggaggactctttccatctgcagcagttcttccga
gactctgatgagctcaagagctggatcaatgagaagatgaagactgcaactgatgaggcc
tacaaggacccatccaacctgcagggtaaggtgcagaagcaccaggccttcgaagccgag
ctctctgccaatcagagccgcattgatgctctgcagaagtcaggacaggagctggtcgat
gggaaacactatgcctccagcgaggtgtccacccgaatggatgaggtcagctctcagtgg
aagaaacttttggaggcaactgaactcaaaggaattaagctgcgtgaagcaaaccagcag
cagcagttcaatcgtaatgtagaggacatcgagctgtggctgtatgaggttgagggacac
ttagcctccgatgactttggcaaagacctgaccagcgtccagaaccttcagaaaaaacat
gctctgctggaggctgatgtggctgctcaccaggaccgtattgatggcattactattcag
gccaagcagtttcaggaggctggccattttgatgctgataacatccgcaaaaaacaagag
gctctgttggcacgctacgaggccctaaaggagcccatggctgcccgtaaacaaaagctg
tcagactctctgcgccttcagcaactttttagggacgtagaagatgaggagacctggatc
cgagagaaggaacccattgcatcctccaccaacagaggaaaagaccttattggagtccag
aaccttctgaagaaacaccaggctctgcaagcggaaatctctggccatgaacctcgaatc
aaggctgttacacagaagggagaggccatgattgatgagggacactttgccggggaggat
gtgaaagctaagctgcaagagctgcataaccgttgggatggactgaagggaaaagcagcc
cagcgtagacaggatctggaggactcccttcaggctcagcagtactttgctgatgccaat
gaggctgagtcttggatgagagagaaggagcccatcgtaggaagcaccgattatggcaaa
gacgaagactctgcagaggctctgctgaagaagcacgaggcactgatgtctgatctgagt
gcatatggcagcagcatccaggccttaaaagaacaagccgaggcctgcagacaacaagtg
gcacccactgatgatgagactggcaaggagctggttcttgctctatatgactaccaggag
aaaagtccacgtgaggtcaccatgaagaagggcgacatcctcactttgctcaacagcacc
aacaaggactggtggaaagtggaagtgaacgacaggcagggctttgttcccgcagcgtat
gtgaagaagttggatccgactcaatcttcctctcgcgagaatctgctaaacgaacagggc
agcatcgctctgcgacaggagcagattgacaatcagactgtggtcaccaaggaggtgtgc
agcgtgtctgtacgcatgaagcaggtggaggaactgtatggtacactgcaagagttggga
gagaagaggaaggacatgctggagaagagttgcaagaagtttatgcttttccgtgaggcg
aatgagctgcagcagtggatcaatgagaaagaatcagcgcttactaatgaggaggtcggc
tctgatctggagcaagtggaagtgctgcagaagaagtttgatgatttccagaaggatctg
aaagcaaatgagtctcgactgagagacataaacaaggtggcatctgagctggagtctgaa
ggactgatggcagaagaggctcctgttgtgcaggcccagcaagtagagatgctgggctca
gctcctggcaaggatgaagcagatgccaaaggtgcatctccgtggaagtctgttcgcttg
gctgttcaaacaacggccaactttaatactattaaggagctgaacaaccgctggaggtcc
ttgcagcagctggctgaagatagaagcaacatgctgggcagtgctcatgaggtgcagagg
ttccacagggatgcagatgagaccaaggaatggatcgaagagaagaaccaagccctgaac
actgataactacggccatgatcttgccagcgtgcaggctctgcaacgcaagcacgaaggc
tttgagagagacctggctgctttaggggacaaggtaaactctcttggtgagactgctgag
cgtctgattcagtctcatcctgaggctgtggacgacatccaggagaagtgcactgagctg
aacacagcctggagcagcctggtgggtcgtgctgaccaacgcaaagaaaaactgggcaac
tctcacgacctgcagcgcttccttagtgactttagagatctcatgtcctggatcaatgga
atcagaggactggtgtcttcagatgagctggccaaggacgtcactggagctgaagccctt
ttggagagacatcaggaacaccgcactgagatcgacgctcgtgcaggcaccttccaggcc
tttgagcaatttggacagcagctgcttgcccgtggccactatgccagccccgagatccaa
cagaagctggaggctcttgaacgggaacgtgctgacctggaaaaagcctgggtccagcgc
aggatgatgctggatcagtgcctggagctgcagctgttcaaccgagactgcgagcaggct
gaaaactggatggctgctcgtgaggccttcttggccagcgatgacaagggagactccctg
gacagtgtggaggctctcatcaagaaacatgaggacttcgataaggctatcaatgtgcag
gaagagaaaattgcagcactgcagtctttcgctgaccagctcattagcgctgaccactat
gccaaacctgagatcttcaatcgccgcaatgaggtcttggacagatggcgccgccttaag
gctcagatgattgagaaacgctctaagctgggtgaatctcagactctgcagcagttcagc
agagatgtggatgagattgaagcttggatcagtgagaaactccaaacagccaccgacgag
tcttataaggacccaaccaacatccagagcaagcaccagaagcaccaggcttttgaggct
gagttacacgctaatgctgatcgtatccgtggggtgattgacacaggcaatgctctcatc
cagagaggtgcctgtgctggaagtgaggatgccgtcaaggctcgtcttaatgctctggat
gagcagtggcagttcctcgtcaacaaatctgccgagaagagtcaaaaactgaaggaggca
aacaagcagcagaacttcaacactggcatcaaggactttgacttctggttgtctgaggtt
gaggctcttcttgcctctgaggattatggaaaagatctagcctcagtcaacaatctcctt
aagaagcaccaacttttggaggctgacatttctgctcatgaggatcgtctgaaggatctc
aatggccaggctgacagtctgatggccagcaatgccttcgacacctctcaggttaaggac
aagcgtgatgccgtcaacggacgctttgtcaaaatcaagagcatggctggtgggcgccgt
gccaagctgaatgagtcacatcgtctgcaccagttcttcagggatctggacgatgaagaa
tcttggatcaaggaaaagaagttgttggtgagctcggaggattacggacgtgatttgaca
ggagtacagaatctaaggaagaaacacaagaggctggaggctgagctgggagcgcacgag
ccagctattcagtctgtgttggagactgggaagaagctgtctgatgacaacaccattgga
caggaggagatccagcagaggctggcccagtttgtggagcactggaaagagctgaaagat
ctggctgctgctcgtggccagaggcttgaggagtcgctggagtaccagcagtttgtggca
aatgtggaggaagaggaagcttggattaatgagaaactgaacctggttggaagtgaggat
tacggtgatactctggcagctgtgcagggcttgctgaagaaacacgaagcgtttgaaact
gattttactgtgcacagggaccgagtgaatgatgtgtgttccaatggagatgaacttatc
aaaaaggagaaccacaacgtggagaacatcatggctaaaatgaaggccctgcgtgggaaa
gtgacagagctggagagagctgcagctcagaggaagtctaaactggatgagaactctgcc
tttcttcagttcaactggaaggctgatgtggtggagtcttggattggtgagaaggaaaac
agcctgaagaccgatgactatggtcgtgatctttcctcagtgcagactctgctcactaaa
caggaaacctttgacgctgggcttcaggccttccagcaggaaggtatcaccaatatcaca
gccctgaaagaccagctattggcagccaaacatgtgcaatccaaagccatcgaggctcgt
catgccaccctgatgaagcgctggaaccagctgctctccaactcagccgctcgcaagaag
aagcttctggaagcccaggagcacttcagaaaggttgaagatctgttcctcacctttgcc
aagaaggcctcagccttcaacagctggtttgagaatgctgaagaagatctgacagaccct
gtgaggtgcaactctctggaggagatcagggctctgcgggacgcccatgatgccttccgc
tcctcactcagctccgctgaggccgactttaaccaactggcagaacttgatcgccagatc
aagagctaccaagtggcctctaatccatacacttggttcaccatggaggctctagaggag
acctggaggaaccttcaaaagatcatcaaggagcgagagctggagctacagaaggagcag
aggaggcaggaagagaacgataagctcagacaagagtttgcccaacatgccaatgctttc
catcagtggctgcaggagaccaggacataccttctggatggcatagcctatcggagggta
atccgtgtctatcagtatgaagtcgatgatgatctttctggaaggtcctgcatggtggaa
gaatccggaactctagagtcacagctagaggccactaagcgcaagcaccaggagattcgt
gccatgcgcagtcaactaaagaagatcgaggatctgggagcagccatggaggaggcactg
atcctggacaacaaatacacagagcacagcaccgtgggtctggctcaacagtgggaccaa
ctcgaccaactgggcatgaggatgcaacacaacctggaacaacagatccaagccagaaac
actacaggagtaacagaagaggctctgaaggagttcagcatgatgttcaagcacttcgac
aaagaaaaatctggacgtctcaatcaccaggagttcaagtcttgcctgcgctctctaggt
tacgacctgcccatggttgaagaaggagaaccagatccagagttcgaatccatcctggac
attgtggatccaaacagggatggaaacgtgtccttgcaggagtacatggcctttatgatc
agccgagaaacagaaaatgtgaaatcaagcgaggaaatcgaaagcgccttccgtgctcta
agcgccgagaacaaaccctacgtcactaaggaagaactctaccagaacctgtccaaggaa
caagcagactactgcatttcccatatgaagccctacttggacagcaagggccgcgaaatc
ccgtcagctttcgactttgtggaattcacccgctcgctctttgtcaactga
DBGET
integrated database retrieval system
