Garra rufa (doctor fish): 141293106
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Entry
141293106 CDS
T11039
Symbol
rnf145b
Name
(RefSeq) RING finger protein 145
KO
K23789
E3 ubiquitin-protein ligase RNF145 [EC:
2.3.2.27
]
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
grf04121
]
141293106 (rnf145b)
Enzymes [BR:
grf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
141293106 (rnf145b)
Ubiquitin system [BR:
grf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
141293106 (rnf145b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRC8_N
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-RING_11
zf-ANAPC11
Prok-RING_4
zf-P11
DUF1272
zf_RING_Vps8_fungal
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
141293106
NCBI-ProteinID:
XP_073681259
LinkDB
All DBs
Position
19:8006167..8037441
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AA seq
690 aa
AA seq
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MAMKARVEAVLNVGLRIPSIMLLEVLYRWDVSSFFQKIQRSSLNNNPLFQYKYIALYLHY
VGYILSLVLLTLPRQHLVQLYLYVLTALLLFAGHQLSRDYVRGELDSGYEGPLYLEPLSM
NRFTTALIGQVVVCTLCSCVMQTKQIWLFSAHLLPLVARLCLVPLETIVFINRFAMIFTG
LEVLYFIASNLLVPYNLAKTAYRELVQVVEVYGLLALGMSLWNQLVLPVLFMCFWLVLFA
LQIYTYFSTRDQPPSRERLLFLFLTSIAECCSTPYSLLGLVFTVSFVALGVLTLCKFYLQ
GYRAFMNDNAMHRGMTEGITLLILAVQTGLIELQVIHRAFLLSIILFVVVASILQSMLEI
ADPIVLALGASRDKSLWKHFRAVSLCLFLLVFPAYMAYMICQFFRMDFWLLIIISSSILT
SLQVLGTLLIYILFMVEEFRKAPVENMDEVIYCVNGTYRLLEFLVAVCVVAYGVSETLFG
EWTVMGSTIILVHSYYNVWLRAQLGWQSFLLRRDAVHKIQSMPTASALQLQQHNDICSIC
YQDMKSAVITPCSHFFHANCLKKWLYVQETCPLCHGQLKSQLQPTSFPGAIPQGTSPEAE
QEQSEPQVEMDTEEGTQAKNTPPVTETSAEPELEMDLLSGSLEVQPKECDVAAESSADPP
GDLDGDGSCSTSDVHSSSLTNDNPQLLSAC
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaaggcccgtgtggaagcggttctgaacgtgggtctgcggatccccagcatc
atgctgctggaggtgctgtaccgctgggacgtcagctccttcttccagaagatccagcgg
agcagtctcaacaataaccctctcttccagtacaaatatattgccctgtacctgcattat
gtcggctacatcctcagtctggtgttattgactttaccccggcagcatctggtgcagctc
tacctctatgtgctcacagctcttctgctttttgctggacaccagctctccagggattac
gtacgtggagagctggactcgggttacgagggacccctctacctggagccgctgtccatg
aaccgctttaccacagcactcattggtcaggtcgtggtgtgtacgctgtgttcctgtgtc
atgcagaccaaacagatctggctgttttctgcacacctgctccccctagtggccagactg
tgtcttgtgcccctagaaaccattgtcttcatcaaccgctttgctatgatcttcactggt
ctggaggtgctttacttcatcgcctctaacctgctggtgccatacaatctagccaaaact
gcctacagagagcttgtgcaggtggtggaggtgtatggtttgctggctctgggcatgtct
ctgtggaatcagctggttctgcctgttctcttcatgtgcttctggctggtgctgtttgca
ctgcagatctacacctacttcagtacacgggaccagccgccctccagagagaggctgctc
ttcctgttcctcaccagtatcgctgagtgctgtagtactccttattctctgctggggctg
gtcttcactgtgtcttttgtggcgctgggcgtcctcaccctctgcaagttctacctacaa
ggttacagagctttcatgaacgacaacgccatgcataggggcatgacggagggcatcact
ttgctgatcttggctgttcagactgggctcattgagctgcaggtcattcacagagctttc
ctcctcagcatcatcctcttcgtcgtggtggcttccatcctgcagtccatgctggagatc
gctgaccccatagttctggcactgggggcctccagagacaagagtctatggaagcacttc
agagcagtgagtctgtgtcttttcttgctggtcttccctgcttacatggcttacatgatc
tgccagttcttccgcatggacttctggctgctcataatcatctcctccagcatccttaca
tcactgcaggttcttggcacccttctgatctacatactctttatggtggaggagtttcgt
aaggctcctgttgaaaacatggatgaggtcatctactgtgtcaacgggacctaccggctc
ctggagttcctggtggccgtctgcgttgtggcctatggggtttcagagaccctttttgga
gaatggactgtaatgggctccaccatcatcctggttcactcctactataacgtctggcta
agagcccagctgggctggcagagcttcctattgcgcagagatgcagttcacaagatccaa
agcatgcccactgcttctgcattacaactccagcaacataatgacatctgttctatctgc
tatcaggatatgaagtctgctgtcatcacaccatgcagccactttttccatgccaactgc
ttaaagaagtggctgtacgtacaagaaacgtgtcctctgtgccacggccagctcaaaagc
caattacagccaactagctttccaggtgccatcccccaaggcacttcaccagaggcagaa
caggagcagagtgagccacaggttgaaatggacactgaggaaggcacccaagcaaaaaac
actcctcctgttacggaaacctcagctgagccagagcttgaaatggacctgctatcgggg
agcttggaagtccagcccaaagaatgtgatgtagcggcagagagcagcgccgacccgcct
ggtgatttggatggtgatggttcgtgcagcacgtcagatgtccattcctcttcattaaca
aatgacaaccctcaactcctatcagcctgttag
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