Garra rufa (doctor fish): 141293233
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Entry
141293233 CDS
T11039
Name
(RefSeq) DEP domain-containing mTOR-interacting protein
KO
K20402
DEP domain-containing mTOR-interacting protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf04140
Autophagy - animal
grf04142
Lysosome biogenesis
grf04150
mTOR signaling pathway
grf04156
Integrated stress response (ISR) signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
141293233
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
141293233
04140 Autophagy - animal
141293233
09143 Cell growth and death
04156 Integrated stress response (ISR) signaling pathway
141293233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141293233
Membrane trafficking [BR:
grf04131
]
Autophagy
Other autophagy associated proteins
mTORC1 complex
141293233
mTORC2 complex
141293233
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEP
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
141293233
NCBI-ProteinID:
XP_073681365
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All DBs
Position
20:complement(16978529..16983675)
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AA seq
394 aa
AA seq
DB search
MMTRHQKAEVMIAGEQLRLRVHDSKLIKDRRHHLRTYPNCFVAQELIDWLIAHKEVPDRE
TAVQLMQHLMDHDIIHHVCDKWPVFKDAKYLYRFRTDDGTFPFHTEVKIFMRGQRLYEHL
VTSKDSILQLRQEKGVAYERSFPGYMLIDWLLQNGEIESRRQGLDLCKALLEHGIIQHVS
LKHHFFDSGLLYQFCINIRRRRRLSELLHETESEEVECITHQSQEDPAESPFTLDKAPSL
EGNSDFLSVQPPMDLKVPTNGQCGSLTKQQHSSCGYPLTASITAALAVRCNPTSVLKRHV
TCEELLSLGAPYVKKVLTILGDALGWGFVVRGKSPCYVQAVDPGSPAAAAGIKVRQFVCR
VNGRSVLHLDYRTLSKLVMTGPRVVTLEVMEPLD
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccagacaccaaaaggctgaggtaatgattgccggagaacaattaagactgcga
gtacatgacagcaagttgataaaggaccgcagacaccatttgcgaacgtacccgaattgt
tttgtggctcaggagcttattgactggctgattgctcataaagaagtgcctgatcgagag
actgcagtccagcttatgcagcacctcatggaccatgatattattcatcacgtgtgtgat
aaatggcccgtgttcaaagacgccaaatacttgtacagattcagaacagacgacggcaca
tttcctttccacacagaggttaagatcttcatgcgtggacagaggctgtatgaacatttg
gtgacaagcaaagactccatcttacaactgagacaggaaaagggagtggcttatgaacgt
tctttccctggttacatgttaattgattggctgctacaaaacggcgaaatagagtctcga
cggcaaggactagatctctgcaaggccctactagagcatggtatcattcagcatgtctct
ctgaaacaccacttttttgacagcgggctgctgtatcaattctgtattaacattcgccgt
cggcgccgtctttctgaactgttgcatgagacagagagtgaagaggttgaatgtataaca
caccaaagccaagaagacccagctgaaagtcccttcacactggacaaagctccttcactt
gaaggcaacagtgacttcttatctgttcaacctcctatggatttaaaagtacctacaaat
ggacaatgtggaagtttgaccaaacagcagcatagttcatgtggatacccactcactgct
tctattaccgctgcccttgcagtacgatgcaatcccacatcagtgctgaagagacatgta
acctgtgaggagttgttatctctgggtgctccttatgtaaaaaaagttcttacgatactg
ggtgatgccctaggctggggctttgtcgtacgaggaaaatcaccttgttatgttcaggct
gtggatcctggaagccctgctgcggcagcaggaattaaggtacgccagtttgtgtgccga
gtaaatggacgcagtgtgcttcacctggactatcgtactctttcaaagctggtgatgact
ggaccccgtgttgttactttagaagtgatggaaccattggattaa
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