Garra rufa (doctor fish): 141293242
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Entry
141293242 CDS
T11039
Symbol
rbm39a
Name
(RefSeq) RNA-binding protein 39a isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141293242 (rbm39a)
Spliceosome [BR:
grf03041
]
Common components
Common spliceosomal components
General mRNP proteins
141293242 (rbm39a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
PRP38_assoc
RRM_occluded
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
141293242
NCBI-ProteinID:
XP_073681376
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All DBs
Position
20:complement(17910214..17919096)
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AA seq
525 aa
AA seq
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MADDLDIEAMLEAPYKKDDNKSLSTNGHEERSKKKKKSKSRSRSRSRDKKRSRSRDRKKS
HDRRRSRSKDRKRSRSRDRRRSRSRSRERGGRYKAPFSGLKFNGGPRGKTGPPPAIKLSR
RRSRSRSPFKKDKSPIRQPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDV
RIISDRNSRRSKGIAYIEFVDSTSVPLAIGLSGQRLLGVPIIVQASQAEKNRAAALANNL
QKGSSGPMRLYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFSDAE
CAKKALEQLNGFELAGRPMKVGHVTERTDASTASSFLDNDELERTGIDLGTTGRLQLMAR
LAEGTGLQIPPAAQQALQMSGSMVAMAAATAAMNPGLSFNINVPTNQALNLPSQPIATHC
FQLSNMFNPNSENDPGWEIEIQDDVIEECNKHGGVIHIYVDKKSAEGNVYVKCPSIPAAM
AAVSALHGRWFGGKMITAAYVPLPTYHNLFPESVQATQLLMPSRR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatttggacattgaagcaatgctcgaggctccatataaaaaggatgacaac
aagtccttaagtaccaatggccacgaggagcggagcaagaagaaaaagaagagcaaaagt
cgcagcagaagccgcagccgggacaagaagagaagcaggagtcgtgatcgcaagaagagt
catgaccgcaggaggagccgcagcaaagatcgaaagcgcagccgcagcagggatagacgg
cgcagtcgttccaggagcagggagcgtggtggtcgctacaaagctccattttctggcctg
aaatttaacggtggtcccagggggaagactggcccaccacctgccatcaaactaagccgc
agaaggtctagaagccgcagtcctttcaagaaagacaaaagccctataagacagcccatt
gataatctcacccccgaagaaagggatgcacgcacagtgttctgcatgcagctggcagcc
agaatccgacctcgagacctggaggaattcttttctgcagtgggaaaagtgcgagatgtg
agaatcatctctgatagaaactccagaagatccaaaggaattgcatacattgagtttgtg
gattccacttctgtacctttggcaattggcctgtctggtcaaagacttctcggagtacca
atcattgtacaggcttcacaggctgagaagaacagagcagctgcgttggccaacaaccta
cagaagggcagttctggacctatgagactgtatgttggctcgttgcatttcaacatcaca
gaagacatgctccgaggcatctttgaaccttttggaaggattgatagcattcaactgatg
atggacagtgaaacaggccgatcaaaaggatatggctttatcacattttctgatgctgaa
tgtgctaagaaggctctggaacagcttaatggctttgagttggctggcagaccaatgaaa
gtgggacatgtgacggagcgcactgatgcctccactgccagctccttcctagataatgat
gagctggaaagaactggcattgatttgggaactactggtagacttcaactcatggccaga
ctggccgagggtactggtctgcaaatcccacctgctgctcaacaggcccttcagatgagt
ggctccatggtagctatggctgcagctactgctgccatgaaccctggattgagttttaac
atcaatgtgcccacaaaccaggctttgaatctaccatcacaaccaattgcaacgcactgt
ttccagctgtctaacatgttcaatccaaactcagaaaatgatcctggttgggaaattgag
attcaggatgatgttattgaagagtgcaacaaacacggtggagtcatacacatatatgtg
gacaagaaatcagctgaaggtaatgtctatgtgaagtgtcccagcattcctgctgctatg
gctgctgtcagtgcattacatggacgttggtttggaggtaaaatgatcacagcagcttat
gtccctcttcctacataccacaaccttttcccagagtcagtgcaggcaacacagcttctt
atgcccagtcgccggtga
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