Garra rufa (doctor fish): 141293308
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Entry
141293308 CDS
T11039
Name
(RefSeq) acidic mammalian chitinase-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00520
Amino sugar and nucleotide sugar metabolism
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
141293308
Enzymes [BR:
grf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
141293308
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
CBM_14
Motif
Other DBs
NCBI-GeneID:
141293308
NCBI-ProteinID:
XP_073681428
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Position
20:complement(18210985..18213601)
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AA seq
453 aa
AA seq
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MDMGCYFTNWSQYRPGIGKYTPANVDPFLCTHLLYAFAMINYANELVTYEWNDEVLYKAF
NELKNKNPHLKTLLAIGGWNFGSSQFSIMVSTAANRQKFIQSSINFLRTYGFDGLDLDWE
YPGSRGSPPEDKQRFTLLCKELIEAYEAEGKATGRPRLLLSAAVAAGKGTIDGGYEIAEI
AKSLDFINVMTYDFHGTWESFTGHNSPLYTGSKDEGELIHFNVDSAMRYWRDNGTPVEKL
RMGFATYGRTFRLSSADTGVGAPASGPAAAGTYTREAGFWSYYEICGFLAGTTLQWIEDQ
QVPYATKNNEWVGFDTKESYETKVRYLKDQNFGGAFVWALDLDDFAGQFCNQGNYPLMGH
LRNLLDIELPPLPPTTTLKPGQTTTTTTTTTTTTTHAPGSGFCNGKADGLYANPDDPNKY
YNCAGGRTFVNSCGPGTVFDDSCKCCNWPKRSH
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggacatgggctgctacttcaccaactggtctcagtacagacctggaattggaaagtat
acgcctgcaaatgtcgaccctttcctttgcacacaccttctctatgcttttgcaatgatc
aactatgccaacgagctggtcacctacgagtggaacgatgaggttctctacaaggccttc
aatgaactcaagaacaaaaacccccatcttaaaactctgctggctattggtggatggaac
tttggttcatcacagttctccatcatggtgtccactgctgcaaaccgtcagaagtttatc
cagtcttccatcaatttcctgagaacttatggatttgatggtttggacttggactgggaa
taccctggatcaagaggaagtccaccagaagacaaacaaagattcacactgctgtgcaag
gaacttattgaggcctatgaagctgagggcaaagctactggcagacccagactgttgctg
agtgctgctgtagcagctggcaaagggacaattgatggaggatatgagattgctgagatt
gccaagtccttggacttcatcaatgtgatgacttacgacttccatggaacttgggagagc
ttcacaggacacaacagccccctgtacacaggctcaaaggatgagggcgaattgatccac
ttcaatgtggattctgctatgcgctattggagggacaacggtacccctgtggagaaactc
agaatgggttttgccacatacggtcgcactttccgtctgtcatctgcagatactggtgtt
ggagccccagctagtggacctgctgcagctggaacctacactcgcgaggctggattctgg
tcttactatgagatctgtggattcttagcgggaacaaccctccagtggattgaggatcag
caggtgccttatgccacaaagaacaacgagtgggttggatttgacaccaaagagagctac
gaaactaaggtccgttatctgaaagatcagaactttggtggagccttcgtctgggctctt
gatctggatgactttgctggacagttttgtaatcaggggaactatcctctcatgggccat
ctgcgaaatcttctggatatcgaattgcctcctctgcctccaaccaccaccctcaaaccc
ggacaaacaaccacaacaactaccacaactaccaccaccaccactcatgctccaggatca
ggattctgtaatggaaaagccgatggactctatgctaaccctgatgaccccaacaaatac
tacaactgtgcaggaggccgtacttttgtgaacagctgtggtccaggtactgtgtttgat
gacagctgtaagtgctgtaactggcccaaacgcagtcactaa
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