KEGG   Garra rufa (doctor fish): 141293317
Entry
141293317         CDS       T11039                                 
Name
(RefSeq) prolyl 3-hydroxylase 1-like
  KO
K08134  procollagen-proline 3-dioxygenase 1 [EC:1.14.11.7]
Organism
grf  Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:grf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:grf03110]
    141293317
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:grf00535]
    141293317
Enzymes [BR:grf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.7  procollagen-proline 3-dioxygenase
     141293317
Chaperones and folding catalysts [BR:grf03110]
 Other chaperones and cochaperones
  Others
   141293317
Proteoglycans [BR:grf00535]
 Extracellular matrix (ECM) proteoglycans
  Basement membrane proteoglycans
   141293317
SSDB
Motif
Pfam: TPR_leprecan TPR_P4H 2OG-FeII_Oxy_3 HMA_2
Other DBs
NCBI-GeneID: 141293317
NCBI-ProteinID: XP_073681438
LinkDB
Position
20:complement(7501023..7511746)
AA seq 844 aa
MWTALCLIPILSTIHFALCDNQSNGLFEPYDLLFDNAVEAYYKQDWLAVILNMERALRNK
AALRKIQTHCRLSCANHTAFEEPLPDVGIPIPGTGAVEDLAFFQRILKRADCVNACESDK
LGPPTVHKVSETVDLEFKKRTPYNYLQVAYFKINKLDKAVAAANTFFMANPDHAEMKQNL
EYYRMMAGVQETDFKDLEERPHMAAFLEGKIHYSAEVFAPAIEHFEEAVEEYFTAYEECR
VLCEGAFNYENYMEYNADLFQSMTDHYLHTLNCKQNCAVDLASTAGRETPFEDFLPSHFN
YLQFSYYNSEKYEQAIECAKTYLLFHPEDEVMAQNLMYYTAVLGDDKAVNITAREVVKQH
IKRSLLEKELLYFGYEMFGKTFVDPDTWTPEEIMPKKLRDKQKADKETAARITEEISNLM
KEIETLVEEKSKESSDLAKFVKDDNNPSATPETANKLPFDDNTVSLTSTALNGSQRVVLD
GVITSDQCQELHSLSSAAAIQDGFKAAPSPHSASEMFQDIKVLKALQEDLVPLKSARLLS
DLSEKIRKVLESNFGLESPLYFSSANLVCRSAIEKQEERGDCLLISELHNCIKDPSAYSD
QGYSAILYLNDDFEGGDFIFTKSDAKTVSAVVKPLCGRVVGFRAGQENLHGVTAVTKGQR
CAVVLRFTLDPHHNEKERLQAEELLKKLSGPLEADVQKTGMDSEAKPSEPEVTVSAKTTE
KDTVKTSTSAEQPTKATEDNKTDSKVVKKSEKPKAKASKKPAKTQTQTKAKADKTKSKES
DKTKTTTTEKKKSKPANKTKPVTSDEKKKTGKATVKNTADDKKTKPKSTEPKQDSTAEKH
KEEL
NT seq 2535 nt   +upstreamnt  +downstreamnt
atgtggaccgcactgtgcctgatcccaatcctctccactatccatttcgccttgtgtgat
aatcaaagcaatggattattcgagccatacgacctgcttttcgataacgcggtggaggcg
tattataagcaggactggctggctgttatcctgaacatggaaagagctttacggaataaa
gcagcgctgcgtaaaatccagacgcactgccgcttatcctgcgcgaatcacaccgctttc
gaggagcctttaccagatgtgggtatcccgatcccaggaacgggggccgtggaggattta
gcgtttttccagaggattctcaaacgggccgattgtgtgaatgcatgcgagagcgataaa
ctgggaccaccgacagttcataaagttagtgaaacggtagacctggagttcaagaagagg
acgccatacaattacctgcaagtggcttactttaagataaacaagcttgacaaggcagtg
gcagcagcaaatacatttttcatggcaaaccccgaccacgcagagatgaaacagaattta
gagtactacaggatgatggctggggtgcaagagactgatttcaaggacctggaggagaga
ccgcacatggctgcatttttagagggcaagattcattacagtgcagaagtttttgcccca
gccatcgagcattttgaggaggctgtggaagaatatttcaccgcttatgaagaatgcaga
gttctttgtgagggagcgtttaattatgaaaactacatggagtacaacgctgatctcttt
caatctatgacagatcattaccttcacactctgaactgcaaacagaactgcgctgtggat
ctggcatccaccgctggaagagagacaccgtttgaagatttcctcccatcgcactttaac
taccttcagttttcatactataacagtgagaaatatgagcaggccattgagtgtgctaaa
acatacctgctcttccaccctgaagatgaagtcatggctcagaacttgatgtattacact
gctgtgctgggagacgacaaagcagtcaacattacagccagagaggttgttaagcagcac
attaagaggtctttgctagaaaaagagcttctttactttggctatgagatgtttggtaaa
acttttgttgatccggacacatggacccctgaggaaatcatgcctaagaaactaagagac
aagcaaaaagcggataaagaaacagctgcgaggattacggaggagatcagtaacctgatg
aaagagatcgagacgcttgtggaagagaagagtaaagaatcatcagacctggccaagttt
gtgaaagacgataacaatccatccgctactccagaaactgccaacaaactcccgtttgac
gacaatacagtatccctgacatccacggccctaaacggttcacagcgggtcgtcctggat
ggcgtaatcacatctgatcagtgtcaggaacttcatagcctctctagtgcagcagctatt
caagatggttttaaagcagcaccctcccctcattcagcgagtgagatgtttcaggatatt
aaggttctcaaagccctgcaggaagatctggttcccttgaagagcgcacgtttgctttct
gacctcagtgagaagattcgtaaggttctggaatccaactttggcctggaatcgcctctg
tatttctccagcgcaaacctggtctgccggtccgccatcgagaaacaggaggagcgtgga
gactgtctgctcatctcagagcttcacaactgtatcaaagatccatcagcatacagcgat
caaggctacagtgccattttgtacctcaatgatgactttgaaggaggagattttatcttt
acgaagtcggatgctaaaactgtctccgctgtggtgaagcctctgtgtggtagagttgtg
ggattcagagctggacaggagaatcttcatggagtgaccgcagtaaccaaaggccagagg
tgtgctgtagtgcttcgctttactctggatcctcatcacaatgagaaggagcgtttacag
gctgaagaacttcttaaaaagctttccggcccgcttgaagctgatgtccagaaaacagga
atggacagtgaagcgaaaccctctgagcctgaagttacagtttctgctaaaacaaccgaa
aaagacacagtaaagacaagcacatctgcagaacaacctaccaaagctaccgaagataac
aaaacggacagcaaagtggtgaagaaaagcgaaaaaccgaaggccaaagcatccaaaaag
ccagcaaaaacacaaacccaaacaaaagctaaagcagacaaaacaaagagcaaagagtca
gacaaaacaaaaaccacaacaacagagaaaaagaaatcaaaaccagctaacaagacaaaa
cctgtaacgtcagacgaaaagaagaaaacaggcaaagcgactgttaaaaatactgcagat
gacaagaaaacaaagccaaagagcacagaacctaaacaggactctacagctgaaaaacac
aaggaggagttatga

DBGET integrated database retrieval system