KEGG   Garra rufa (doctor fish): 141293407
Entry
141293407         CDS       T11039                                 
Symbol
elavl1b
Name
(RefSeq) ELAV-like protein 1b isoform X1
  KO
K13088  ELAV-like protein 1
Organism
grf  Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:grf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:grf03019]
    141293407 (elavl1b)
   03041 Spliceosome [BR:grf03041]
    141293407 (elavl1b)
Messenger RNA biogenesis [BR:grf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     141293407 (elavl1b)
   mRNA cycle factors
    Stress granule specific factors
     141293407 (elavl1b)
Spliceosome [BR:grf03041]
 Common components
  Common spliceosomal components
   General mRNP proteins
    141293407 (elavl1b)
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_10 BRAP2 RRM_3 RRM_DEAH11 RhsPI
Other DBs
NCBI-GeneID: 141293407
NCBI-ProteinID: XP_073681541
LinkDB
Position
20:35640306..35661791
AA seq 362 aa
MAVRRGHIRYLKVCEVQNQGNDRDSHKGGSSVKQEVYDMPNGYEDHMSDEPSDAKTNLII
NYLPQNMSQEELRSLFSSIGEVESAKLIRDKMAGHSLGYGFVNYVNPSDAERAINTLNGL
RLQSKTIKVSFARPSSDSIKDANLYISGLPKTMTQKDVEDMFTQYGRIINSRVLVDQASG
LSRGVAFIRFDKRSEAEEAIKDLNGSKPAGASEPITVKFAANPNQTKNSQLLSQLYHNPS
RRFGGPVHHQAQRFRFSPMSVDHMSGASGMNVSGSSSSGWCIFIYNLGQDADEGILWQMF
GPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRMGDRVLQVSFKTSKS
HK
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggccgtcagaagaggacacataaggtatttgaaagtttgtgaggttcagaaccagggt
aatgacagagactcacacaagggtggcagctcagtaaagcaggaagtgtacgacatgccg
aacggttatgaggaccacatgagtgatgagccaagtgatgcgaaaaccaacctgatcatc
aactacctgccccagaatatgagccaggaggagctccggagtctcttcagcagcattggc
gaggtggagtcggccaaactcattagagacaagatggcaggccacagtttagggtacgga
tttgttaactatgttaaccctagtgatgcagaaagggcaatcaatacactcaatggcctg
agactacagtctaaaactatcaaggtctcgtttgcccggccgagctctgacagcatcaaa
gatgccaacctttatatcagcggtttacccaagaccatgacgcagaaggatgtagaggac
atgtttactcagtatgggcgtatcataaactcccgtgtactggtcgatcaggcctctggt
ctgtcacgtggagttgcattcattcgttttgataagcggtctgaagcggaggaagccatc
aaggatcttaatggatccaaaccagctggtgcctctgaaccgatcacagtgaagtttgct
gccaatccaaaccagaccaagaattcccagctgctttcgcagctgtaccacaacccatcc
cgtcggttcggaggacctgttcatcaccaggctcagcgcttcaggttttcaccgatgagt
gttgaccacatgagcggtgcctccggtatgaatgtgtcgggcagctcttcctctggatgg
tgcatcttcatctacaacttgggtcaagatgccgacgaaggcatcctgtggcagatgttc
ggtccgttcggtgccgtcaccaacgtcaaggtcatccgtgactttaacaccaacaaatgc
aaagggttcgggtttgttaccatgacgaattacgaggaggcagcaatggccatcgccagc
ctgaacggataccgcatgggagaccgagtcctacaagtgtcgttcaaaaccagcaagtct
cacaagtaa

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