Garra rufa (doctor fish): 141293421
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Entry
141293421 CDS
T11039
Symbol
srsf6b
Name
(RefSeq) serine and arginine rich splicing factor 6b
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
grf Garra rufa (doctor fish)
Pathway
grf03040
Spliceosome
grf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
141293421 (srsf6b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
141293421 (srsf6b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
grf03041
]
141293421 (srsf6b)
Spliceosome [BR:
grf03041
]
Common components
Common spliceosomal components
SR proteins
141293421 (srsf6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
141293421
NCBI-ProteinID:
XP_073681560
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All DBs
Position
20:complement(29117427..29122639)
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AA seq
389 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDTRDADDAVYELNGKDL
CGERVIVEHARGPRRDRDGYGGGYGGGGGGGGGGGGGGGGGGRSSSGYSSRSRSGRDKYG
PPVRTEYRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSSSDMRRAL
DKLDGTDINGRKIRLVEDKSRRRRSYSGSRSRSRSRRRSRSRSRRSSRSHSRSRSRSRSR
SKHRSRSRSGRKSRSRSRRKSHSKSPTKSRSRKSKSRSRSRTQKSRSRSTSHKSRSRSDA
RKSRSKSRSKAKSERDSRSRSKEKSVGKGSRSRSASPRENGNGERAKSTSRSPSPKKNRR
QSESPGKRSASRSPSRSKSRSRSRSASQD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagtgtacatcggcaggctgagttatcatgtgcgagaaaaagacatacagagg
tttttcagcggctacgggaagcttttggagatcgatctgaagaacgggtacgggtttgtg
gagtttgaggacacccgtgatgcagacgacgccgtctacgagctgaacggtaaagatctg
tgcggggaacgcgtgatcgtggagcacgcgagaggaccgcggcgggaccgagatggatat
ggtgggggttatgggggcggcggcggtggaggtggcggcggcggcggcggtggcggtggc
ggcgggcgcagcagtagtggttatagcagcaggagccgaagcggaagagacaaatatgga
cctccggttcgcacagagtaccgactgatcgtggagaacctgtccagtcgctgcagctgg
caggatctcaaggacttcatgcgtcaagctggagaggtgacctatgctgatgcccacaaa
gagcggaccaatgagggtgtcattgagtttcgctcctcctctgatatgaggagagctttg
gacaagttggatggcactgatatcaacggaaggaaaatacgccttgtggaggacaagtct
agacgacgtcgctcctactctggaagcaggtcaaggtctcgcagcagacgccgttctcgc
agcaggagccgcaggagttcacgaagccattctaggtccagatctcggtcaaggtcccgc
agcaagcaccgctctcgttctaggtctggtcgcaagtcccgttccaggtctaggagaaag
tctcactccaagtcccctaccaagtcccgctccaggaagtcaaagtctcgttcccgctca
cgtactcagaagtcacgcagtcgctccaccagccacaagtcccgctctcgctccgatgcc
cgcaaatctcgctccaagagtcgctctaaagcaaagtcggagagagattccagaagccgc
tccaaggaaaagtctgtcggtaaggggtcccgaagccgttctgcctcgccaagggaaaat
gggaatggagaacgggccaagtccacttcccgttcgccttcccctaaaaagaaccgccgt
cagtcggagtctcccggcaagcgttctgcatctcgctctccttcacgttcaaagtctcgt
tcccgttctaggtctgcctctcaagactag
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