Garra rufa (doctor fish): 141293456
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Entry
141293456 CDS
T11039
Symbol
ovgp1
Name
(RefSeq) chitinase-3-like protein 1
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00520
Amino sugar and nucleotide sugar metabolism
grf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
141293456 (ovgp1)
Enzymes [BR:
grf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
141293456 (ovgp1)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
TIM-barrel_EndoS
Motif
Other DBs
NCBI-GeneID:
141293456
NCBI-ProteinID:
XP_073681597
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Position
20:complement(18123762..18128804)
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AA seq
489 aa
AA seq
DB search
MNSRLTHLTGLNLLFQFVTCSRLVCYFTNWSQYRAGTAKYLPENVDPNLCTHLIYAFAII
NYVNNIAGSEWNDVALYSTFNALKNQNPQLITLLSVRDQDSSQFSIMLSNWTNRQTFIKS
SIEFLRKYNFDGLDLDWEHKGTFPEDKLKFTILCKELLEAFLAEGQSNKDARLILTATVS
AQKDVIERSYDIPEISKYLDLISVKTFDFHTFKDGITRHHSPLYSASHGEENINSNTDFA
LQYWISQGAPAEKLLMGFAAYGRSFILTSAESEVGAPASNFASPGPYTQEMGLWSYFEIC
LFLNGGEVQWIEDQKVPFSYKGSDWVGYDNLKSFEFKIKYLQEHGFGGAFVWALDLDDFS
GTFCGQGSYPLVNHLKKLLILGANNELDGSMTTSSFPTDGTGSSPPQTCVKILSSLPALK
SQFCANKSDGLYHRMDSLNSFYSCTGKMTNITWCTPADLNDSGVARPSLMIIFFTLGSAS
LLTQWHSLF
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaacagccgattaacacatttaacaggcctaaatttgctttttcaattcgtaacctgt
tcaagactggtgtgttacttcacaaactggtctcagtacagagcaggaactgctaaatac
cttcctgagaatgtggacccaaacttgtgtactcatttgatctatgcttttgccattata
aactatgttaataacatagcaggcagtgagtggaacgatgtggccctttactcaactttc
aatgcacttaagaaccaaaatcctcagctgataaccttgttgtctgtcagagaccaggac
tcaagccaattctccattatgctgtccaattggacaaaccgtcagacattcattaaatcc
tctatagaatttctgaggaagtataattttgacgggctggatttggactgggaacacaaa
ggcacttttccagaagataagctgaaattcactatactgtgcaaggaacttctggaagcc
tttctagctgaaggccagtcaaacaaagacgcaagattaattctgacagcaactgtttca
gcccagaaggatgttattgaaaggagctatgatattccagagatctcaaagtacttggac
cttattagtgtcaagacttttgattttcatacatttaaagatggcattacaagacatcac
agcccgttgtacagtgccagccatggcgaagagaatatcaactcaaacactgattttgca
ctacaatactggatatcccagggagctcctgcagaaaagttgttgatgggttttgccgcg
tatggacgttccttcatcctcacctccgctgagagtgaagttggagccccagccagtaac
tttgcttctcctggaccttatacacaagagatgggcttgtggtcctactttgaaatatgt
cttttcctaaatggtggtgaagtgcagtggatagaagaccagaaagttcctttttcttat
aaaggcagcgactgggtgggctatgataatctgaagagctttgagtttaagataaaatac
ttacaggaacatggcttcgggggtgcatttgtatgggctttggacctggatgatttttca
ggaactttctgtggacaaggcagttatcctttagtcaaccacctgaagaaattgttaatc
cttggagcaaataatgaattggatgggtccatgactacaagctcttttccaacagatggg
acgggctcttcaccaccgcagacatgtgtgaagattctcagctctcttccagccttgaaa
agtcagttctgtgctaacaaatcagatggactttatcacagaatggattccctgaactca
ttttatagttgtactggaaaaatgacaaatatcacttggtgcacccctgccgatttaaat
gattctggtgtagcacgaccatcattaatgatcattttttttacactagggagtgcaagt
ctcctaactcaatggcatagcctattttag
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