Garra rufa (doctor fish): 141293516
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Entry
141293516 CDS
T11039
Symbol
slc6a1b
Name
(RefSeq) LOW QUALITY PROTEIN: sodium- and chloride-dependent GABA transporter 1b
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
141293516 (slc6a1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
grf02000
]
141293516 (slc6a1b)
Transporters [BR:
grf02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
141293516 (slc6a1b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
141293516
NCBI-ProteinID:
XP_073681647
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Position
20:complement(30380199..30389357)
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AA seq
531 aa
AA seq
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MATNGTKASDGHVLTELNEAPTANDKPKTLVVKVQKKKEIPDRETWQGKFDFLLSCVGYA
IGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLETSLGQYTSIGGLGVWKLAPM
FKGVGLAAAVLSFWLNIYYIVIIAWAIYYLYNSFTTELPWKSCDNPWNTDKCFSNYSMAN
VNMTSAVVEFWERNMHQLTDGLEKPGEIRLPLAITLAIAWVLVYFCIWKGVGWTGKVVYF
SATYPYFMLFILFIRGVTLPGAKEGILFYITPEFSKLKESEVWLDAATQIFFSYGLGLGS
LIALGSYNPFNNNVYKDSIIVCCINSFTSMFAGFVIFSIVGFMAHITQRSIADVAASAQV
LEGGLYVFKLFDYYSASGMCLLFLVFFECVSISWFYGVNKFYGNIEEMIGYQPCIWWKLC
WVAFTPLIVAGVFIFSAVQMXPLTMNNYVFPKWGQGVGWCMALSSMILIPGYMGYMFLTL
KGSYKERLRIMIQPTSVVRTQENGPEQQPENPTPANDEALHLTTLPVLHPV
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggccacgaacggcacgaaagcatctgatggacatgttttaacagagctgaacgaagcg
cccaccgccaatgacaaaccaaaaactctggtggttaaagttcagaagaaaaaggaaatt
cccgacagagaaacgtggcagggaaaatttgactttcttctgtcttgtgttggctatgcc
attggacttggcaatgtctggagatttccctatctgtgtggaaaaaacggaggaggggcg
ttcttgattccttactttttgaccctcatatttgctggggtcccgttgtttcttctggaa
acgtccctcggtcaatacacgtccattggtggtcttggagtgtggaaactggcccctatg
ttcaaaggtgttggcctggcagcagcagtcctgtcgttctggcttaacatttactacata
gtcataattgcttgggcaatttactatctgtataactcattcaccacagagctcccctgg
aaatcttgtgacaacccttggaatacagacaaatgtttctcaaactacagcatggcaaat
gtcaatatgacgagcgccgtcgtggagttctgggaacgtaacatgcatcaactgactgac
ggtttggaaaagccgggagagataagactgccactagcaataacactggccattgcctgg
gttctggtctatttttgtatctggaagggcgtaggctggactggaaaggtggtatatttc
tcagcgacatacccgtacttcatgctatttatcctgttcatccgtggagtaacactgcct
ggagcgaaagagggcattttgttctatatcacgcctgagttcagcaagctgaaagaatca
gaggtgtggcttgatgcagccactcagatcttcttttcgtatggtctgggcctgggctct
ctgatcgcccttgggagctacaaccctttcaacaataatgtttacaaagattctatcatc
gtctgctgcatcaattccttcaccagtatgttcgctggattcgtcattttctctatcgta
ggtttcatggcccacatcacgcagcggtccatagcagacgtggctgcatcagcacaagtg
cttgagggtggcctctatgtgttcaaactgttcgactactattctgccagtggaatgtgt
ctgctgttcctggtgttctttgaatgcgtctccatatcctggttctatggtgtcaataaa
ttctacggcaatattgaggagatgattggataccaaccctgtatttggtggaagctgtgc
tgggtcgcattcacccctctcattgtggcgggtgtgttcatcttcagcgctgttcagatg
ngtccgcttacaatgaacaactacgtgttcccaaagtgggggcaaggtgtaggctggtgc
atggccctgtcatccatgattctcatccctggatacatgggctacatgttcctcacccta
aagggctcatataaagagcgccttcggataatgattcagcccacgtcggtggttcggact
caagagaatgggccagaacagcaacccgagaacccaaccccagctaatgacgaggcccta
catctaaccaccctccccgtgcttcaccccgtatga
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