Garra rufa (doctor fish): 141293520
Help
Entry
141293520 CDS
T11039
Symbol
itga7
Name
(RefSeq) integrin alpha-7
KO
K06583
integrin alpha 7
Organism
grf Garra rufa (doctor fish)
Pathway
grf04510
Focal adhesion
grf04512
ECM-receptor interaction
grf04810
Regulation of actin cytoskeleton
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
141293520 (itga7)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
141293520 (itga7)
09142 Cell motility
04820 Cytoskeleton in muscle cells
141293520 (itga7)
04810 Regulation of actin cytoskeleton
141293520 (itga7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
grf04147
]
141293520 (itga7)
04515 Cell adhesion molecules [BR:
grf04515
]
141293520 (itga7)
Exosome [BR:
grf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
141293520 (itga7)
Cell adhesion molecules [BR:
grf04515
]
Integrins
Integrin alpha subunits
141293520 (itga7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
141293520
NCBI-ProteinID:
XP_073681651
LinkDB
All DBs
Position
20:31653805..31716275
Genome browser
AA seq
1048 aa
AA seq
DB search
MSLWRTQRRCTAGLCCLLLTLCSQISAFNLDTTTILIKEGEEGSFFGFSLALHQQLTPEP
HSWILVGAPQARGVGALRSTRPGALYRCPVTPEKCERVDIDGHVSLAQESKDNQWLGVTV
KSQGIGGKVVTCAHLYELREHVNQTFETRDPIGRCYLLSEDLTERDDLDGGEWKFCEGRS
KGHEQFGFCQQGLSASFTPDKNYVLFGAPGTYNWKGLLFMASPVEDALVYKTLEPSKSSF
EDVAQNSYLGFSVDSARGLMSKSELTFVAGAPRANHTGAVVLLRKDNVYRLMPDHILWGE
ELASSFGYSVTVADLNSDGWTDLIVGAPNFFDRKAEIGGAVYVYLNPASHWEKARPIRLN
GTYDSMFGMTVSSAGDLDRDGYEDIAVGAPFDGDGKVFIYRGSSSGIDTKPSQVLDGLNA
GVKRLGYSISGGLDIDGNFYPDLAIGSLSDQVVLYRSRPVVHVIRDISIEPQYIDLTQHN
CQGEDGVCVDVKACYTYTAYPDSYSPHITLGVHFEADVERRKLSLPHRVYFLDRSLSEPE
YVHSVEVELRGQKNPVCQTVTFVVQENIRDKLRPVFLAITHTIRRSRHHHHTGHKHHNQL
SPVLSLSPSNTLYSEVNFVREGCGEDKICQSNLQLSYQFGTKAHISNTFTPLPQDDSDVP
VFSLSDQRSVVLEVTVTNMPSDPENPQEDGDDAHAAQLLVSLPNTLSYSALMGQQVLCEV
NQNGSQALCELGNPLKREATVTFYLILSTSAITIETTSLSVHLALSTTIIMYFHDNSIVS
NTGQSLQTFGSASLNILWPYELINRKWLLYPSALQVDSQPPTHCEPQSALNPLHLPLDQL
PHAENLKSSRKTRSHLETEEDLVPKSPIGKITPAVSASERRKSLTLDCLLGSARCVLFQC
PLHTFSGSIHFRIRAHMWNSTFIEEFSSVSAVELLVRANITIKSSIRHLVLKDAATQVSV
MIYPEHGLSDQHSIPWWIILIAVLAGIIVLALLVCLLWKCGFFQRVQHKDKVPRYKAVKI
LRQETQFQDKTFILHKKQWATHWSDGTI
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttggcgcacgcagcggaggtgcacggctggactctgctgcctcctgctcact
ctttgctcccagatctcagcatttaacctggacacaacgaccatcctcatcaaggagggt
gaggagggaagtttcttcggcttctctttggctttacaccagcagctcacacctgaacct
cacagctggatattggttggggcgcctcaggcccggggtgtaggagctttgcggagcact
cgtcccggtgcactgtatcgctgtccagttacaccggagaagtgtgaacgagtagacatc
gatggacatgtgagtctggcccaagagagcaaagacaaccagtggttgggtgtcacagtc
aaaagtcaagggattggtggaaaagtagtgacatgcgctcacctctatgagctcagagaa
catgtcaaccagacgtttgagacccgtgacccgattggacgctgttatttgctgagtgaa
gatttgactgagagagatgatctggacgggggagagtggaagttttgtgaaggtcgttct
aaaggacatgagcagtttggattctgccagcagggcctgtcagctagtttcacacctgac
aaaaactacgtcctctttggggctccggggacctacaactggaaagggctattatttatg
gccagtcctgttgaagatgctctggtctacaaaacactggaaccgtccaaaagctcattt
gaggatgttgctcagaacagctacctgggtttttctgtggactcagccagaggtcttatg
agtaagtctgagctgacatttgttgctggagctcctcgagctaatcacacaggagccgtg
gttctgctacgaaaggacaacgtctaccggctgatgcctgaccacattctgtggggtgag
gaactggcttcctcgtttggttactctgtgactgtagctgatctaaacagtgatggttgg
acagatcttatagttggagctccaaatttctttgaccgaaaggcagagattggaggtgct
gtgtatgtttacctgaatccagccagccactgggaaaaggcaagaccgatccggctcaat
ggaacatatgactctatgtttgggatgaccgtcagcagtgctggcgatctggaccgggat
ggttatgaagatattgctgttggagccccatttgatggagatgggaaagtttttatttac
cgtggctcttcatctggcattgataccaaaccctctcaggttctggatgggcttaatgca
ggagtcaagcgactgggctattccatatccggaggactagatattgatgggaatttttat
ccagatctagctattggctcactcagcgatcaggttgtgctttacaggtcacgtccagtg
gtccatgtgattcgagacatttccattgagcctcagtatattgatctcacgcagcacaat
tgccagggtgaagatggtgtttgtgtggatgtgaaggcttgctatacgtacactgcttat
ccagactcctactcaccacatatcacacttggtgtacattttgaggcagatgtagagcgc
aggaagttgagtcttcctcacagagtttacttcctggaccgcagtttatcagagccggag
tacgttcattctgtggaagtggagctacgtggacaaaaaaatcctgtctgccaaacagtg
acttttgttgtacaggaaaacattcgggacaagctgcgccccgtctttctggcaatcaca
catactatacggagaagccgacatcaccaccacacaggacataaacaccataaccagctg
agccctgtactgagcctcagtccctcaaacacactctactctgaggtcaattttgtcaga
gaagggtgtggtgaggataaaatatgccagagcaaccttcaactctcctatcagtttggc
acaaaagcacacatttcaaataccttcactcctctaccacaagatgactctgatgtgcca
gtcttttctctgtcggatcagaggtcagtagtgctggaggttacagtgactaacatgcca
tctgacccagaaaacccacaggaagatggagatgatgcccatgccgctcagctactggtg
tctctgccaaacacgctctcgtactctgcactcatgggacagcaggtgttgtgtgaagtc
aatcagaacggctctcaggcgctgtgtgaactcggcaatccactgaaaagagaagcgacg
gtcacattttatcttattctgagcacttctgcgatcactatagaaacaacatcactgtct
gttcatcttgcactgtctacgaccattataatgtattttcatgacaacagcatagtgtct
aatactgggcagtctctccaaacgttcggctcagcctctctgaacatcctttggccatac
gagctgatcaataggaagtggctgttgtatccaagtgctctgcaggtggatagccagccg
cccactcattgtgagccccagtcagcactcaaccctctgcacctgccccttgaccagctg
ccgcacgcagaaaacctcaagagcagcagaaagacacgctcacatctggagaccgaagaa
gacctggttcccaaaagcccaataggcaaaatcactccagctgtttctgcatctgagaga
aggaagtctctcacactagattgtttactgggctctgcacgctgtgtgctcttccagtgt
cctctacacacattctctggctcaatccatttcaggatccgagcgcatatgtggaacagc
actttcattgaggagttttcatctgtcagtgctgtggagctgctggtcagagccaatatc
accattaaatccagcattagacatctagtgctaaaggatgctgctacacaggtttcagtg
atgatttacccagagcatggactctcagaccagcacagcatcccttggtggatcattctc
attgccgtcctggctggaattattgttcttgcgctgctcgtgtgtttactgtggaagtgt
ggtttcttccaaagggttcaacataaagataaagtgccccgatataaggctgtgaagatc
ctgcggcaagagacacaatttcaggacaagacttttattttgcacaaaaaacaatgggct
acccactggagtgatgggacaatctaa
DBGET
integrated database retrieval system
