Garra rufa (doctor fish): 141293547
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Entry
141293547 CDS
T11039
Symbol
lhfpl5a
Name
(RefSeq) LHFPL tetraspan subfamily member 5 protein
KO
K23893
LHFPL tetraspan subfamily member protein
Organism
grf Garra rufa (doctor fish)
Pathway
grf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
141293547 (lhfpl5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
grf02000
]
141293547 (lhfpl5a)
03037 Cilium and associated proteins [BR:
grf03037
]
141293547 (lhfpl5a)
Transporters [BR:
grf02000
]
Other transporters
Pores ion channels [TC:
1
]
141293547 (lhfpl5a)
Cilium and associated proteins [BR:
grf03037
]
Other cilia and associated proteins
Stereociliary proteins
141293547 (lhfpl5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
L_HMGIC_fpl
PMP22_Claudin
Claudin_2
Otopetrin
Motif
Other DBs
NCBI-GeneID:
141293547
NCBI-ProteinID:
XP_073681672
LinkDB
All DBs
Position
20:39568440..39577074
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AA seq
226 aa
AA seq
DB search
MTKMLSAQEAAKIYHTNYVRNARAVGVLWTIFTICFAIICVVVFIQPYWIGDSVDTPQSG
YFGLFHYCIGNPITGELVCKGSALDFGSIPSGAFKTAMFFVGISLLLIVGTIVCFSLFFF
CNSGSVYKICAWMQLAAATCMVIGCMIYPDGWDSEEVKRMCGQRTDKYTLGNCTVRWAYI
LAIISIMDSLTLSFLAFVLGNRQDKLLPEDFQVEEKKGIDLDLKLH
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaatgttatccgcccaggaggctgctaagatctatcacactaattacgtgagg
aacgcacgagccgttggagtgctgtggaccatcttcaccatctgcttcgccatcatctgt
gtggtggtcttcattcagccgtactggatcggagacagtgtggacacgccgcagtcggga
tactttgggcttttccactactgcatcgggaaccccatcacaggagagctggtgtgtaaa
ggcagcgctttggactttgggtccatcccttcaggtgccttcaaaaccgccatgttcttt
gttgggatctctttgctgctgatcgtggggaccattgtctgttttagtttgttcttcttc
tgcaactcaggcagcgtctacaagatctgcgcgtggatgcaactggcagctgcgacttgt
atggtcatcggctgtatgatctatcctgacggctgggactcagaggaggtgaagaggatg
tgtggccagcggacagataaatacacgctgggtaactgcacggtgcgctgggcgtacatc
ctggccatcatcagcatcatggactcactaacattatccttcctggcctttgtacttggc
aaccggcaagacaaactactgccagaggacttccaggtggaggagaagaaaggtatagac
ttggacttgaagctacattga
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