Garra rufa (doctor fish): 141293567
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Entry
141293567 CDS
T11039
Symbol
ddx19b
Name
(RefSeq) ATP-dependent RNA helicase DDX19B
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf03013
Nucleocytoplasmic transport
grf03015
mRNA surveillance pathway
Brite
Enzymes [BR:
grf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
141293567 (ddx19b)
Messenger RNA biogenesis [BR:
grf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
141293567 (ddx19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
141293567
NCBI-ProteinID:
XP_073681690
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All DBs
Position
20:complement(39949129..39963564)
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AA seq
479 aa
AA seq
DB search
MSSDSWAQAVDEQEAAAESIGSLQINEKDDKPKAEANGAKTEGEGEKTEEDDKDDKAAQS
LLNKLIRSNLVNTTNQVEVLQRDPSSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQE
TALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPENKWPQCLCVSPTYELALQTGK
VIEQMGKFYPEVQLVYAIRGNKLERGTKLQEQIVIGTPGTVLDWCQKLRFIDPKKIKVFV
LDEADVMIATQGHQDQSIRIQRMLPKTCQMLLFSATFEETVWNFAKRIVPDPNIIKLKRE
EETLDTIKQYYVICNSKEEKFQALCNIYGAITIAQAMIFCHTRKTAGWLAGELSREGHQV
ALLSGEMQVEQRAAVIERFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDN
ETYLHRIGRTGRFGKRGLAINMVDSKFSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggattcgtgggcccaggctgtcgatgaacaagaagccgcggcggagtcgata
ggcagcttgcaaataaatgagaaagacgacaagccaaaagctgaagcgaatggggcaaaa
acagaaggagagggagagaagaccgaggaggatgataaagatgacaaggcagcacagtca
ctactgaataaactgatccgcagtaatctagtgaacacgaccaatcaagttgaagtcctt
cagagggatcccagctctccgctgtactccgtcaagtcctttgaagagctgcgattgaaa
cctcagctacttcaaggggtgtatgccatgggttttaacaggccttccaaaatccaggag
actgctttgcccatgatgctcgcagaacctccacagaatctcatcgctcagtctcagtcg
ggcacgggtaaaacggctgcctttgtgctggccatgttaagtcacgtggaccctgaaaac
aaatggcctcagtgtctgtgcgtgtcccccacatacgagctcgccctacagacgggtaag
gtcatcgagcagatgggcaaattctaccctgaagtccaactagtgtatgccatcagagga
aacaaattggagcggggaacaaaattacaggaacagatcgtgattggtactcctggaact
gttttggattggtgccagaaactgagattcatcgaccccaagaagatcaaggtgtttgtt
ctggatgaagctgatgtcatgatcgccacacagggccatcaagaccagagcattcgaatc
cagaggatgcttcctaaaacttgtcagatgctgctgttctctgccacatttgaggaaacc
gtgtggaactttgcgaagaggatcgttcctgaccccaacatcattaaactgaagcgtgag
gaggagactcttgacaccatcaagcagtactacgtcatctgcaacagcaaggaggagaaa
ttccaggctttgtgcaacatctacggagccattactatcgcacaggccatgatcttctgc
cacactaggaaaacggccggctggctggcaggagagctgtccagggaaggccaccaggtg
gcgctgctcagcggagagatgcaggtggaacagagggcagcggtcatcgaacggtttcgt
gacggcaaagagaaagttctcgttaccactaacgtctgcgctagaggtatcgatgtggaa
caagtttcagtggttatcaacttcgatctgccggtggacaaggatggcaatcctgacaac
gagacgtatctgcacagaatcgggcgtactgggcgattcggcaagagggggctggcgatc
aacatggtggacagtaaattcagcatgaacatcctcaaccgcatccaggagcacttcaat
aagaaaatcgagaggctggacacggacgatttggatgaaatcgagaaaatcgccaactga
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integrated database retrieval system
