Garra rufa (doctor fish): 141293568
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Entry
141293568 CDS
T11039
Symbol
rbbp7
Name
(RefSeq) histone-binding protein RBBP7 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
grf Garra rufa (doctor fish)
Pathway
grf03082
ATP-dependent chromatin remodeling
grf03083
Polycomb repressive complex
grf04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
141293568 (rbbp7)
03083 Polycomb repressive complex
141293568 (rbbp7)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
141293568 (rbbp7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
grf03036
]
141293568 (rbbp7)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
141293568 (rbbp7)
Histone modification proteins
HAT complexes
HATB complex
141293568 (rbbp7)
HDAC complexes
Sin3A-HDAC complex
141293568 (rbbp7)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
141293568 (rbbp7)
PRC2.2
141293568 (rbbp7)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
141293568 (rbbp7)
Heterochromatin formation proteins
Other heterochromatin formation proteins
141293568 (rbbp7)
Chromatin remodeling factors
NuRD complex
141293568 (rbbp7)
NuRF complex
141293568 (rbbp7)
NuRF complex (fruit fly)
141293568 (rbbp7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
141293568
NCBI-ProteinID:
XP_073681691
LinkDB
All DBs
Position
20:33761958..33787532
Genome browser
AA seq
426 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDY
VVHRLVLGTHTSDEQNHLVIASVQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE
LEGQAS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaagaagtgtatgatgatgcagtggaggagagagtaataaatgaggaatac
aagatctggaagaaaaacacaccattcctgtatgatctagttatgacgcatgctctcgag
tggccgagtttgacggtgcagtggcttcctgatgtgaacaggcctgagggaaaggactac
gtggttcatcggctggtgttgggcacacacacttcagatgaacagaaccacttggttatc
gccagtgttcagatccctaatgatgatgctcagtttgacgcgtcccattatgacagtgag
aaaggagcagagtttggagggtttggatcggtgagcggaaagattgagattgaaattaag
atcaaccatgaaggagaagtgaacagagccagatacatgccacaaaacccctgcatcatc
gccaccaagacccctacttctgacgtgctggtgtttgactacaccaaacacccatctaag
ccagaccccagtggagagtgtagtccagaccttagactgcgcggccatcagaaggaggga
tatggtttgtcctggaaccctaacctgagtggaaacttgctcagtgcatcagacgaccat
acgatctgtctgtgggacatcagtgctgttccaaaggaagggaagatagtagatgccaag
accatcttcacaggacacacagctgtggtggaggatgtgtcctggcaccttctacacgaa
tcactgttcggctctgtggctgatgaccagaaactcatgatctgggacacacggtccaat
aacacctcaaagcccagtcactctgtggacgcccacacagctgaagtcaactgcctgtcc
ttcaacccctacagcgagttcattctggccactggctcagcagacaagactgttgcattg
tgggatctgcgtaacctgaagctgaagcttcactcttttgagtcacacaaggatgaaatc
ttccaggtccagtggtctcctcataatgagaccatcctggcctccagtggcacagacaga
cgcctcaatgtttgggatctgagtaaaatcggagaagagcagtctgcggaggatgcagag
gacgggccacctgaactgctgttcattcatggtggacacacagctaagatctccgatttc
tcttggaacccaaatgaaccttgggtaatctgttctgtgtcagaggacaacattatgcaa
gtttggcagatggctgagaacatctacaatgatgaggagccagacacccctgcatcagag
ctggaggggcaggcgtcgtaa
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