Garra rufa (doctor fish): 141293578
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Entry
141293578 CDS
T11039
Symbol
bhlhe40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141293578 (bhlhe40)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
141293578 (bhlhe40)
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
DUF5365
DUF4874
Motif
Other DBs
NCBI-GeneID:
141293578
NCBI-ProteinID:
XP_073681704
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Position
20:9623791..9627340
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AA seq
400 aa
AA seq
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MERITSAQPPPCMAKHSSVDIADMQGMDFPMYVYKPRRGMKRSEDSKDTYKLPHRLIEKK
RRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALNNLLEQQQQKIISLQN
GMQIGEQGNGHSENSEEMFRSGFHLCAKEVLQFLANQETMRDLTPAHIINHLQKVASDLI
QSPPSPRLGEPTPKAQETREKPASPQPKAAEGHAKNCVPVIQRTYPHSSEQSGSDTDTDS
GYGGELEKRELKAQRPIYYGKDAGDLQYGGSIKEELDEPQAKRQRSDSSEDESHDVVGGH
SPYVSFSPHQPLCMPFYLFPPGAAAAYLPMLEKCWYPGAMPVLYPGLGGSPPGMSPEKLP
SSLVMSSRVGSPVSTPTSMDSPALLQALKQVPPLNLETKD
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggattaccagtgctcagcctcctccatgtatggccaaacactcctcggtggat
atcgcggacatgcaaggaatggactttcctatgtacgtgtataagccccggcggggaatg
aagcgcagtgaggacagtaaggatacatacaaactgcctcatcgattgatcgagaagaaa
aggagagacagaataaatgagtgcatcgcgcagttgaaggatttgctgcccgagcacctt
aaactcactactctgggacacttggagaaagctgttgtgttggagctcacgctcaaacat
gtgaaggctcttaacaacctgctggagcagcagcaacagaagatcatttctttgcagaat
ggaatgcagattggtgaacaaggaaatgggcattcagaaaacagtgaggagatgtttcgt
tccgggttccacttgtgtgccaaggaggttcttcagttcctggccaaccaggagacaatg
cgtgacctgacgcccgcccacataatcaaccacctgcaaaaggtggcgtctgaccttatt
caaagcccgccaagccctcgcctaggcgagcctactcccaaagctcaagaaaccagggag
aaaccggcaagcccacagccgaaagcagcagaaggccatgctaagaactgtgtgccagtc
attcaaaggacttatccccacagtagtgagcaaagcggaagtgatacggatactgacagc
ggctatgggggcgagcttgaaaagcgtgaactcaaagcccagcggccgatctactacggc
aaagatgctggagatctccagtatggcgggagcattaaagaagagctggacgagccacag
gccaagcgccagaggtctgactcgtcggaggatgaatctcacgacgtagtggggggccac
agcccctacgtgagcttttctccacaccagcccctttgcatgcccttctacctctttccg
cctggagcggccgccgcgtacttgcccatgctagagaagtgttggtacccgggtgccatg
cccgtattgtacccagggcttggcggttccccgccgggtatgtcccccgagaagctcccc
tcgtccctggtcatgtcctcgagagtgggctcccccgtctcgacaccgacatccatggac
tctcctgcgctcctgcaggccctgaaacaagttcccccattaaacctggaaaccaaagac
tga
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