Garra rufa (doctor fish): 141293579
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Entry
141293579 CDS
T11039
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
grf04131
]
141293579 (tmf1)
Membrane trafficking [BR:
grf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
141293579 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
Motif
Other DBs
NCBI-GeneID:
141293579
NCBI-ProteinID:
XP_073681705
LinkDB
All DBs
Position
20:complement(23438539..23455243)
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AA seq
1136 aa
AA seq
DB search
MSWFNASHLSSFAKQALTSAQKSIDRVLDIKEEDQWGDSAGQTITDAPGKPVSTGWGMNQ
WNSPSEEHTKTLPPSSEAITKPVTWTVVDESEDFFSAFLPHGDTQTLGNTKVVSVPPAKS
NRRIRDKAAKEKELDVSDAQGQTDLSTSSSQETIEIKPTGTELSEQNSFSADEQSQPELV
VPAPVIAPEQTTEQETVEDQTETDGLVLPSEVTLTNVPLSSSEVESVGVFEPALSIETKN
SVKTLPVPPKEILLESKDAKSEDRQSDTPSPPVSAFSSGTSTTSDIEVLDHESVLSESSA
SSRQENAEAKAGLHLMQGSFQLLSASTCADFPRLDEYPKLTESCGSSSDAFERIDSFSVQ
SLDSRSVSEVNSDDEIPGNRTLASITAGHLPGPVQSAPQTKQEEEEVMTESVNDQSLDDN
EMEESGRSATPVNCEQTDELQEGDQEPETDLTLTSQKTDVNETVISQSTKEKQGDSPCQI
SELQKIIEELSSRLEKRETQLLVVSKDKARLEEECDNLKDEMISLKEETSTVQSLKDEFT
QRIAEAERKAQLACKERDIAKKEIKGLREELASRLKSNETLELIKEKEEQIRELLEEGEK
LSKQQLQHSNIIKKLRVKERESDGQITKQTKKLKEQEEELKHLQQVLDGKEEVEKQHREN
IKKLNAVVECQEKELSKLQTSSEELQEKNRSLQAALDSSYKELAELHKANASKDSEAQEL
ALSREVQAKEELSLALEKVQEESRLQQEALANQVADLRLAIQRAEQQQAKKEDYLREEIS
ELQQRLQEAETRNQELSQSVTSATRPLLRQIENLQASLGAQTASWEKLEKNISDRLAEAQ
AQLAVSVEKERSATEELLAIRAQIASLESQTSLLRQEKGRLQGQLDAERMRREKLEDDLS
RERVELENLKGEHGRVLEEGKKEKLLLTNQLEMEKMKVEQEKKKCYLAQEALKEKERKSL
SLSVTDAPASSTPSLSRSSSVSGAEHAGLPSSLFSQQEDSLDHSFSTMTMSISGTNLYEA
ARLGGGSSVIESLQSQLKLREGEIAQLQMEIASLERSRTVMAEELVRLTNLNDEMDSKVK
EIPRLKVQLKDLEQRHNTILQMYGEKAEEAEELRLDLEDVKNMYKTQIDELLKNQK
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcgtctcatctgtcgagttttgctaaacaagctctgacatctgct
cagaaatccatcgacagagttctggatattaaagaagaggaccagtggggtgactcggcc
ggtcagaccattactgatgctccaggcaagccggtatcaacaggatggggtatgaaccag
tggaactctccctctgaggaacataccaaaactctccctccatcatctgaggccattact
aaacctgtcacatggactgtggttgacgaatccgaggattttttcagtgcctttctgcct
catggtgatacgcaaactctaggcaacactaaagtggtgtctgtgccacctgctaagtcg
aaccgcagaatccgggacaaagcagcaaaggagaaggagcttgatgtcagtgatgcacaa
ggtcagacagacctcagtacaagcagcagccaggaaactatagagataaagccaactggg
acagagctttcggagcaaaattcattctcggcagatgagcagtcacaacctgaactggtc
gttccagctccggtcattgcaccggagcaaactaccgaacaggagactgtcgaggaccag
acagagacagatggtttggttttaccttcagaagtcacacttacaaatgtacctttatcc
tcctcagaggttgaatctgttggtgtgtttgaaccagccttgagcattgagaccaaaaat
tcagtaaaaactttgcctgtccctcctaaagaaatcctgttagaatccaaagacgctaaa
tcagaggacagacaaagcgacaccccctctccccctgttagtgccttctcttctggtact
tccactaccagcgacatagaggttttggaccatgagagtgtgctaagcgagagctcagcc
agctccagacaggagaacgcagaggctaaagctggtctgcacctaatgcaaggctctttc
caactgctttccgcttcaacatgcgccgacttccctcgtctggacgaataccctaaactt
actgaaagctgtggctcctcgtctgacgcctttgagcgcattgactcgtttagcgtgcag
tcgttggacagccgtagtgtcagtgaagtgaattctgatgatgagatcccgggcaaccgc
accttagcttccatcacggctggacatttgcctggtcctgttcagtcagcgccacagacc
aaacaagaggaagaggaggttatgactgagtcagtgaatgaccagtcgctggatgataat
gagatggaggaaagtggccgcagtgcaacgccggtaaactgtgagcagacagatgagctg
caggaaggtgaccaggaacctgaaacggacctcacactgaccagccaaaaaactgatgtg
aatgaaactgtaatatcacaaagtactaaggagaaacaaggagattcaccctgtcagatt
tctgagctccaaaagattatcgaggagctctctagccgactagagaagagagaaacacag
ttgctcgtggtcagtaaagacaaggccagacttgaagaagagtgtgacaatctcaaagat
gaaatgatcagcttgaaggaagaaacctctactgtacagtctctaaaagatgagttcact
cagcgtatagctgaagctgagaggaaagctcagcttgcctgcaaggagagagacattgcc
aaaaaggaaattaagggccttagagaagaactggcaagcaggttgaagtcaaatgagact
ttggaactgataaaagagaaagaggaacagatccgagagcttcttgaagaaggtgagaaa
ctgtccaagcaacagttgcagcactccaacatcataaagaaactgcgtgtgaaagagaga
gagagtgatggacagatcaccaaacagaccaaaaaactgaaggaacaggaagaagaacta
aagcacttgcagcaggttttggatggtaaagaagaagtcgaaaagcagcacagagagaac
atcaagaagctgaatgctgtggtggagtgtcaggagaaggaattaagtaaactgcagacc
agcagcgaagagcttcaggaaaagaaccgcagtttgcaagcagccctcgacagctcctac
aaagagctagcagagctgcacaaggccaatgccagcaaggatagtgaagcccaggaacta
gcactgagcagagaggtacaggcgaaagaagagctgagtctggctttggagaaagttcaa
gaagagtcccgcttgcagcaagaggcactggccaatcaggtggcagatctgaggctggct
atacagagagctgagcagcagcaggccaagaaggaagattacctgagggaagagatcagt
gagttgcagcagaggttacaagaagcggagaccagaaaccaggaactaagtcaaagtgtt
acatcagcaacacggccgcttcttcgacagatagagaacctccaggcctcgcttggggcc
cagacagcatcatgggaaaaactagagaagaacatatctgaccgcttagctgaagcacaa
gcccagcttgctgtttccgtagagaaagagcgttcggctacagaggagctgctagccatc
cgagcgcagatagcatctttagaatctcagacttccctgttgaggcaggagaagggacgt
ctacagggacagctggatgcagagaggatgcggcgggaaaaactagaggatgacttaagc
agggaacgtgtagagctggagaatcttaaaggagaacatggtcgagtattggaagagggc
aagaaggaaaagttgctactcaccaaccaattggaaatggagaaaatgaaggtggagcag
gagaagaagaaatgttaccttgcacaagaggcccttaaagaaaaggagaggaagtctcta
agtctgtctgtgacggatgctccagcgtcttccactccttcactatcccgctccagttct
gttagtggggctgagcatgctggcttaccttcctcccttttctcacagcaggaggattct
cttgaccattcttttagcactatgaccatgtccatcagtgggactaacctatatgaggca
gctcgactgggtggtggatccagtgtcattgagagcctccagtctcagctcaaactcaga
gagggcgagatcgcccagctgcagatggagattgctagtctagagagaagccgcactgtg
atggcagaagaactggtgcgactgaccaatctgaatgatgagatggacagtaaagtgaag
gaaatccctagactgaaagtgcaactgaaggatcttgaacaaaggcacaacacaattctg
cagatgtatggagagaaggcagaggaggcagaagagctgcgtctggacctggaggatgtg
aagaacatgtataaaacacaaatagatgaactattaaaaaatcaaaaataa
DBGET
integrated database retrieval system
