Garra rufa (doctor fish): 141293697
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Entry
141293697 CDS
T11039
Symbol
rpn1
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
KO
K12666
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 1 (ribophorin I)
Organism
grf Garra rufa (doctor fish)
Pathway
grf00510
N-Glycan biosynthesis
grf00513
Various types of N-glycan biosynthesis
grf01100
Metabolic pathways
grf04141
Protein processing in endoplasmic reticulum
Module
grf_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
141293697 (rpn1)
00513 Various types of N-glycan biosynthesis
141293697 (rpn1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
141293697 (rpn1)
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Motif
Pfam:
Ribophorin_I
DNA_repr_REX1B
FliD_C
Motif
Other DBs
NCBI-GeneID:
141293697
NCBI-ProteinID:
XP_073681850
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Position
20:complement(40360866..40374606)
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AA seq
598 aa
AA seq
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MWSAGAVSFVLVSCFFCGSLCADGLVNEDVKRTLDLSSHLAKITAEIQLANHGSSRVNSF
TLALEDELAPHLAFIGASVKGEEEEDESLELKEATIHGQSGKFFEAKLPSSLAPGAKLRV
KVETVFSHVLKPFPSHITQAERQLVVFQGNHYLYSPYPTRSQTTRVRLASKTVESYTKLG
NPTKSDEAIEYGPFKDVPPFSQDVMKIHYENNAPFLTISSITRTIEVSHWGNIAVEETID
LRHTGAYLKGPFSRYDYQRQSDSGISSVKSFKTILPASAQDVYYRDEIGNISTSHLQVLD
DSVEVEIRPRFPLFGGWKTHYIIGYNLPSYEYLYNLGDQYALKMRLVDHVYDDQVIDQLT
VKLILPEGAKHIHMDTPYPIARSRDELHYTYLDTFGRPVLVATKSNLVEQHIQDVVVHYT
FNKILMLQEPLLVVGAFYILFFTVIIYVRLDFSITKDPAAEVRMKVASITEQVLTLVNKR
LGLYRHMDEVVNRYKQSRDTGALNSGRKTLEAEHRTLTNDINSLQTRLKTEGSDLAEKVG
EIQKFDGHLKDLVCRSCQEAERLVAGKVKKDAYIESDKTLSGKRQELVGRIDSLLDAL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcgccggagcggtgagttttgtgctagtctcgtgttttttctgcgggtcgctg
tgtgcggacggactggtgaacgaggacgtgaagcgcacgctggatctgagctctcacctc
gcgaagatcaccgccgagatccagctcgcgaaccacggatcctcgcgggtcaacagcttc
acactcgccctggaagacgagctcgcgccgcacctggccttcatcggtgcatctgtaaaa
ggggaggaagaggaggatgaaagcttggagctgaaggaggcaactatccatggacaaagt
ggtaaattcttcgaggcaaagttaccatcttctctcgctccgggggctaaactgcgggtg
aaggttgagacggtgttcagtcacgtgttgaagcctttccccagccacatcacccaggcc
gagcgtcagctggtggtcttccaggggaaccactacctgtactctccgtaccccacacgc
tcccagaccacacgcgttcgcctggcctccaaaaccgtggagagctacaccaagctgggt
aaccccaccaagagcgacgaggccatcgagtacggacccttcaaagatgttcctcccttc
agccaggatgtcatgaagatccactatgagaacaacgcccccttcctcaccatcagcagc
atcactcgcaccatcgaggtctcccactggggcaacatcgccgtggaggaaaccatcgac
ctgagacacaccggagcttacctgaaggggcctttctcccgctatgactaccagagacag
tctgatagcggcatttcctcagtcaagtctttcaagaccattctcccagcctccgctcag
gatgtttattaccgcgacgagatcgggaacatctccacctctcacctccaggttctagat
gattccgttgaagttgaaatccgtccccgtttcccgctgttcggaggctggaaaacgcat
tacatcattggttataatcttcccagctacgaatatctctacaatctgggagatcagtat
gccctgaagatgcgtctggttgatcatgtgtatgatgaccaggttattgaccagctaact
gtgaaactgatccttcctgagggagccaagcatatccacatggacaccccctaccccatc
gcccgcagtcgggacgagctgcattacacttacctggacacctttggcagacctgtgctg
gtggccaccaagagcaatctggtggagcagcacattcaggatgttgtggttcattacacc
ttcaataagatcctgatgctgcaggagcctctgttagtggtgggagccttctacatcctc
ttcttcaccgtcatcatctacgtgcgcctggacttctccatcaccaaggatccagcggcg
gaggtgcgcatgaaggtggcctccatcaccgagcaggtcttgactctggtgaacaagcgt
ctcggtctgtaccgccacatggatgaagtcgtgaaccgctacaagcaatcccgcgatacc
ggagcgctaaacagcggccgcaagaccctagaagcggaacaccgcactctcaccaacgac
atcaattcgctacaaacccgcctcaaaacggaaggatccgatctggctgaaaaagtcggt
gagatacagaagttcgacggccatctgaaggatctggtgtgtcgatcctgtcaggaggcc
gagcggctggtggctggaaaggtgaagaaggacgcctacatcgaatcggataaaaccctg
tcgggcaagaggcaagagctggtcggccgcatcgacagccttctggacgccttgtaa
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