Garra rufa (doctor fish): 141293711
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Entry
141293711 CDS
T11039
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
grf03400
]
141293711 (ap5b1)
DNA repair and recombination proteins [BR:
grf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
141293711 (ap5b1)
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Motif
Other DBs
NCBI-GeneID:
141293711
NCBI-ProteinID:
XP_073681867
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All DBs
Position
20:7312356..7316500
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AA seq
929 aa
AA seq
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MTIAEPWDQRISAFLLSPSQFLATTTSESFLAEVLHELRNDKANDHLKILLVSVLLEHPT
ILCTSSSEGEETALELLSVFSHTPQKSIILKCNVMLAITNVIICTSCLATHTKTAEDWLD
LLFQTIQDTNDYRCGLSQQPLRATACDCLREMEICNPGLLSQKLEALYLLKQQETTVLHQ
SYCMLYTLGLKNAIKILAKQKDITDLEFKSILGGNEGFAWKSNQLGLTALPINMMVQVPC
LPPGLDCKELKSIMSSLLEESYLLTPISQSALLRELVEVVAMVPGLSPTLFKSQLLRLFG
TAEASLMHATLFMKDTFTDSLFTAEDENFLLKRLVGTAQHPLLRIPEKLFYMECILHFPE
NRPISSSGEESLPVLVTPRLAASLHPTVFNDSATMLCRLNLLCLVHLEADEGEADKGIDY
LFDHIMALLKIVDNEGTREVVVTSFRALFIFLMHFNGVEELSEKLIEKLCDMYSRHSRLA
PNLIGLADRIQEHLDDPVWSVRLLRGLQKCIMEMPPLQLTIHNLGWHLKVLKRVAKEGQI
TQKNTIYLLLNVLINSNLCERGNWQVGNAVLAVCRNLLEHPSIDQVFIELADLLQYISVH
YDDTDIKDHARFYYTLLTNLSWEKLTGVLVKGLDGGRAKERSHSAIMAESEGIASNLTVH
KTNRHVLQLIKVHDKALPESSESLQTTKEAENWLEVYQSQFQTPGFASEVTLRYNLTHAK
ESDALFDKVFTICLHFELKDSNYAKVNDIHVPCVFKDRKPPEVKVKLKPFQPYPTTLCIS
AIFTTQDGRSWHSQLPDVSVSFSEIFLPLPLPPNTSCESKEQVFDHIWEDVASGNPDKSA
ISLFCFKTGDESLATLIETHFQGYLITDQPIERSWKVLFFLPPMRHVLLKITQAEDAVQV
SVATDNWELLPFVNSYLQNINCGTTVTDG
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgactattgcggaaccctgggatcagagaatatctgcctttctgctgagtccatctcag
tttttggccaccaccacatctgagagcttcttggctgaagttctacacgaactgcgtaat
gataaggccaatgatcatctcaagatcctccttgtgtcagtgcttctggagcatccgacc
attctctgcacgtcatcctctgagggtgaagaaaccgcccttgaactgctgtcagtcttt
tctcacacaccacagaaatccatcatcctcaagtgcaatgtcatgctggccatcaccaac
gtgataatatgcacatcctgcctggctacccacacaaagacagctgaagactggctggac
ctgctgtttcaaacaatccaggacaccaatgactacagatgtggcctctcccaacaacca
ttaagagccactgcttgtgattgcctacgagaaatggaaatctgtaatccaggtttgctt
tctcaaaagctagaggccttatatcttctaaaacagcaagaaaccacagttctgcatcag
tcctactgtatgctttacacactcgggctgaagaatgccattaaaatcttggcgaagcaa
aaggacatcactgatttagagttcaaaagcattttaggaggaaatgaggggtttgcgtgg
aaatccaatcagttgggattgaccgcattgccaataaacatgatggtccaagtcccatgt
ctgccaccaggattggattgtaaagaactcaaatcaataatgtcatccctcctggaggag
tcctatttgcttacgcctatttctcagtctgctttacttagggagcttgtagaagttgtc
gcaatggttccgggactctctccaacgttattcaaatcgcagcttctgcgactttttgga
acggcggaggcttctctaatgcatgctacgctctttatgaaggacactttcacagatagc
ctcttcaccgccgaggacgagaacttcctgctcaagcgtctcgtgggcacagcccaacat
ccgctcctaagaattcccgaaaagctcttctacatggaatgcatcctccacttccctgag
aaccgacccatatccagcagcggagaagaaagtttacccgtgctggttacaccacgtctg
gcagcgtctctccatccaacggttttcaatgatagtgctactatgctctgcaggctgaac
cttctttgcctggtgcatcttgaagcagacgagggcgaagcagataaaggaatcgactac
cttttcgatcacataatggctcttttaaaaatcgtggacaatgaaggtaccagagaagtg
gtggtgacctctttcagagcgttgtttattttcctaatgcactttaacggcgttgaagaa
ctctccgagaagctgattgagaaattatgcgacatgtattccagacattcacgactcgct
cccaatttgattggcctcgcggatcgcattcaggagcatctggatgacccagtttggtcg
gtcaggttgttgagaggccttcaaaaatgcataatggaaatgcctccattgcagttgacg
attcacaatttgggttggcacctcaaagtcttgaaaagagtagctaaggaagggcagatc
acccagaagaacaccatttaccttcttctcaatgttctcatcaactccaacttgtgtgaa
cgaggcaactggcaagttggaaacgctgttcttgctgtttgtcgcaatcttttggagcac
ccgtccatcgatcaggtgtttatcgagttggctgatcttttgcaatacatatcggtgcat
tatgatgacacggatattaaggatcatgctcgtttctactacacactgctcactaacctt
tcatgggaaaagctgacaggggttcttgttaaagggcttgacggaggacgtgccaaagaa
cggtcgcattcggcgattatggccgagagcgaggggattgctagtaacctgaccgtgcac
aaaaccaaccggcatgttttacaactcatcaaggtgcatgataaagccttgccagaaagt
tcagagtcattgcagacaacgaaagaagctgagaattggttggaggtttatcaaagtcag
tttcagactcctggatttgcctctgaggtgaccttgaggtacaatctgactcatgcgaaa
gaatccgatgctttattcgataaagtcttcacaatctgtctgcactttgagctgaaagac
tcaaactatgcaaaggtaaatgacatacacgtaccatgtgtgttcaaagacagaaagcca
cctgaggtcaaagtcaagctcaagccttttcaaccctaccctacaactttatgcatcagt
gccatatttaccactcaagatggacgttcttggcacagccaactgcctgatgtgagtgtt
tcattctctgagatattccttcctcttcctttaccaccaaacacatcctgtgaaagcaaa
gagcaagtgtttgaccacatctgggaggatgtggcctctggaaatcccgacaaatctgct
attagtctgttctgtttcaaaactggagatgaaagtcttgctactctgatcgagacacat
tttcagggttaccttattacggatcagccgattgaaagatcgtggaaagtcttgttcttt
cttccacctatgcgccatgtccttttgaagattacgcaggctgaagatgccgttcaggtc
agtgttgcaacggacaactgggagctgttaccctttgtgaactcctatcttcaaaacatt
aattgtggcacaactgtaacagatggctaa
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