Garra rufa (doctor fish): 141293843
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Entry
141293843 CDS
T11039
Symbol
grin3bb
Name
(RefSeq) glutamate receptor ionotropic, NMDA 3B
KO
K05214
glutamate receptor ionotropic, NMDA 3B
Organism
grf Garra rufa (doctor fish)
Pathway
grf04020
Calcium signaling pathway
grf04080
Neuroactive ligand-receptor interaction
grf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
141293843 (grin3bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
141293843 (grin3bb)
04082 Neuroactive ligand signaling
141293843 (grin3bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
grf04040
]
141293843 (grin3bb)
Ion channels [BR:
grf04040
]
Ligand-gated channels
Glutamate (ionotropic)
141293843 (grin3bb)
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Uds1
Motif
Other DBs
NCBI-GeneID:
141293843
NCBI-ProteinID:
XP_073682012
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Position
20:34793646..34929610
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AA seq
1121 aa
AA seq
DB search
MNFVFYTFLAYFYLGSQIFLLHTLLVQPAHSHPQPCHILARIGHTVRLGALLPPRQSVRV
RAALHRALSGLAESGNNFLPYNLSLDVVAREAPSGDPESLFRCVCQDIVVQGVSAVLAFP
QTQEEIVQMEFMSSFLEIPFISIIEHGEPLKTQNRFHLQMTTRIPPSGLVELLLAVLQRS
GWDESMAVLCQGWEDAGLLNLLKLQGHSDWGPSHWHLRSALNLSHSTPHVANISDFLSEH
FNQDQSPPASVLLFGADPECASTVLRSAHDLGLTLPTVHWIMGQPLSPDALHSIGLPLGL
LAYGEVDRKPLDYYIRDALQLVNRAVTAATVVRPDLALIQNMVNCFDKPNKHELPSSGQY
IARFLSNTSFVGLTGPVSVQRNLSRVNTSQRVHIWSLRRDAVGQPTWVTVGSWEGGRLDV
EEQGLWQGSPPRQRTEGQMGRVGRRWRPGFPVSGSRLRVVTLVEHPFVFTREVDEDGNCP
AGQYCLDAGTNSSETLDHLYNERAQGNSSFLPRDFSKCCYGYCIDLLEKLAEDMNFEFDL
YIVGDGKYGAVKGGQWTGLVGDLLSGVADMAVTSFSINSARSKVIDFTSPFFSTSLGILV
RSKDTAAPIGAFMWPLHWSMWMGIFVALHITALFLTLYEWKSPFGMTPHGRNRVKVFSYS
SALNLCYAILFGRTVSSKTPKCWTGRFLMNLWAIFCLLVLSSYTANLAAVMVGEKTFEEV
SGIHDAKLHHPSQGFRFGTVRESSAEDYMKKSFPEMHEYMRKFNEPTTPDGVATLKTDPP
QLDAFIMDKALLDYEVSIDADCKLLTVGKPFAIEGYGIGLPQNSPLTSNISEFISRYKSD
GYMDMLHDKWYKVVPCGKRVFAVTETLQMGIRHFSGLFLLLCVGVTGALLTLAGEHAFYH
LVLPHIRRRQKFKYWLHTSQKIHRALNMTYEDVKRQRASTEKSCNIQKAQPHPPPPPAPL
GSFARWNNESAKVTQEPKDNKRVHFNLETLNTRRLLSRVMTEGSQASSGSGSASALSSGA
GSLLARVCENGGPVQRPASSSSSSVRSSSPSRESELEELQVKIEEIREHLKAALARRAEL
QTTLAKERAAATIAPPTTVAPPTVTATICPALTKEPADLKR
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgtcttctacacattcttggcatacttttatttgggatcgcaaatattcctt
ctccataccctgctcgtccagcccgctcactctcacccgcagccctgccacatcctagcg
cggataggacacaccgtgcgcctgggtgccctcctgcctccccgccagtcggtccgggtg
cgggcggctctccaccgcgccctcagcggtctcgccgaaagcggcaacaactttcttccg
tacaacttgagcctggacgtggtggctcgggaagccccgagcggagaccccgagtcgctc
ttcaggtgtgtgtgtcaggatatagtggtccagggggtctcggctgtgctcgccttccct
cagacgcaggaggaaatagtacaaatggaatttatgtcctcttttttggaaattcctttt
ataagcatcattgagcacggagaacccctcaaaactcagaatcgcttccacttgcagatg
acaacccgtatccccccgtcgggactggtggagctgcttctcgccgtcctgcagcgcagc
ggctgggatgagagcatggcggtgctttgtcaaggttgggaggatgctggtcttctaaat
ctcctgaaactccaaggccactcagactggggaccctcacactggcacctgcggtctgct
ctgaacctctcccacagcacgcctcacgtggctaatatctctgacttcctttccgagcac
tttaatcaggaccaatctccacctgcctcggttctgctttttggggccgacccggagtgt
gcctctactgttctgcgcagtgcgcatgacctggggctgacattgcccactgtacattgg
attatgggacaacccctaagcccagacgcccttcactctattggtctgcctttaggactg
ctggcctacggagaggtcgaccgcaaaccattggactactacattcgtgatgccctgcag
ttggtcaaccgagctgttactgcagcaacggtcgtacggcccgatctagccctcatccaa
aatatggtaaactgtttcgacaaacccaacaaacacgagctgccctcttcaggacagtac
attgccaggttcctctctaatacgtccttcgtaggattgacaggccctgtcagcgttcaa
cgcaacctctcccgtgtaaacacctctcagagggtccacatttggagtctacgccgcgat
gcagttggtcagcccacgtgggtgactgtaggcagctgggagggcggtaggttggatgta
gaagagcagggattgtggcaaggatcgccccctcggcagcgcaccgagggccagatgggc
agggttggtcgtagatggcggcccggctttcctgtgtcggggagtcgtttacgggtggtc
actctagtggagcacccgttcgtgttcactcgggaggtagacgaggatgggaactgtccc
gctgggcaatattgtctggatgcagggacgaacagctcggaaaccctggaccacttgtac
aatgagcgggctcaaggtaacagcagcttcttgccaagggatttcagcaagtgctgctat
ggatactgtattgatcttctggagaagctggcggaagacatgaactttgaattcgacttg
tacatagttggggacgggaaatacggagcggtcaagggtgggcagtggacggggttggtg
ggcgacctgctaagcggggtggctgatatggctgttaccagcttcagcatcaactcggct
cgcagtaaagtgatcgacttcactagtccgttcttttccacgagtttgggaatacttgtg
cgcagtaaggacacggccgcacccattggagcgttcatgtggccgttgcactggtccatg
tggatgggcatctttgtggcgctacacattacagcgcttttccttacactctacgaatgg
aagagtcccttcggcatgacgcctcatggacgtaaccgcgtgaaggtcttctcctactcc
tcagccctcaacctctgctatgccatcctttttggccgcacagtctccagtaagacgccc
aagtgttggactggacgtttcctgatgaacctgtgggccatattttgcttgctggttttg
tctagttacacagcaaacctggctgcagttatggttggggaaaagaccttcgaagaggtt
tctggaatacatgatgccaagctccaccacccatctcagggatttcgattcggcactgtc
cgggaaagcagtgcagaggattacatgaaaaagagttttcctgagatgcatgagtatatg
cggaaattcaacgaacccaccacacccgacggtgtcgccaccctcaagacagatccgcct
caacttgatgcttttatcatggacaaagccctgctggactacgaggtgtccattgatgcc
gactgcaagctgctgaccgttggtaaaccctttgctattgaaggttacgggatcggactg
ccccagaactcaccactcacctccaacatatctgaattcatcagccgttacaagtcagac
ggctacatggacatgctgcatgacaagtggtacaaggtggtgccgtgcggaaagagagtc
ttcgctgttacagagacgctgcagatgggcattcgccacttctcagggttgttcttgctg
ctgtgtgtgggtgtgactggggccttactcactctggcaggagaacatgccttctatcac
ctggttctgcctcacatccgtcgaagacagaagtttaaatactggcttcacactagtcag
aaaatccacagagcactgaacatgacttatgaggatgtgaaacgacagcgggcgagcaca
gagaaaagttgtaacatccagaaagcccagccgcatccgccacctccacctgctccactc
ggatcctttgccagatggaacaacgagagcgccaaggtgacgcaggagcccaaagacaac
aaaagggtccattttaacctggagaccctcaacacacgccgactcctgtcccgtgtcatg
acggaggggagtcaggccagctccggctccggttccgcctcagcgttgagctcaggggct
gggagtctattggcgagagtgtgtgaaaatggaggccctgttcaacgacccgcctcctcc
tcctcttcctcagtgagatcctcgagcccctccagagagagcgagctggaggagctccag
gtcaagattgaggagatccgcgagcatctgaaagccgctctggctcgtagggcggagctt
cagactacactggctaaagaacgtgcggctgccacaatcgccccgcccaccactgtggct
ccgcccacagtcacagccaccatttgccccgccctcaccaaagagccagcagatctgaaa
aggtga
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