Garra rufa (doctor fish): 141293853
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Entry
141293853 CDS
T11039
Symbol
sptbn1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
grf Garra rufa (doctor fish)
Pathway
grf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
141293853 (sptbn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141293853 (sptbn1)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
141293853 (sptbn1)
Intermediate filaments
Intermediate filament-binding proteins
141293853 (sptbn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
PMC2NT
SOS1_NGEF_PH
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
141293853
NCBI-ProteinID:
XP_073682023
LinkDB
All DBs
Position
20:complement(4472423..4519657)
Genome browser
AA seq
2244 aa
AA seq
DB search
MRIHCLENVDKALQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETE
DNKEKRSAKDALLLWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKK
SNAHYNLQNAFNLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEG
KRIGKVLDNAIETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTY
RTVEKPPKFTEKGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERE
LALRTELIRQEKLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVEAATKKHEAI
ETDIAAYEERVQAVVAVARELETENYHDIKRIAARKDNVLRLWEYLLELLKARRQRLEMN
LGLQRVFQEMLYIMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAV
NANAQKFAVDEEGYKPCDPQVIRDRVAHMEFCYQELTQLAAERRARLEESRRLWKFFWEM
AEEEGWIREKEQILSSDDCGKDLTGAVRLLSQHRALEDEMSGRAGHLQHTVREGQAMADA
GHFGEAKIRERIADVQAQWAALEQLAAVRKKRLEEACSLHQFQADADDVDAWTLDALRIV
STADVGHDEFSTQALVKKHKDASTEVASYRPVIDALHEQAQSLPPEQVQAANVNERLAGI
EERYKEVSELTRLRKQALQDALALYKMFSEADACELWIDEKEQWLNSMEIPEKLEDLEVI
QHRFESLEPEMNNQASRVAVVNQIARQLIHNGHPSEKDIKAQQDKLNTRWSQFRDLVDQK
KESLNSALGVQNYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAA
IEAKLGDLRGEAERLAGEHPDQAKAITGRLAEITAVWEEMKETLQNREASLGEASKLQQF
LRELDDFQSWLSRTQTAIASEDMPNTLAEAEKLLAQHEGIKNEINNYEEDYQKMRDMGEM
VTQGQTDAQYMFLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQIFLRDTKQAEAFLNN
QEYVLAHTEMPTTLEGAEAAIKKQEDFMTTMDANEDKINGVVEAGRRLASDGNINADRIQ
ERAASIDDRHKKNREAAVELLMKLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEAR
NLHSKWLKHQAFMAELQSNKEWLDKIEKEGKQLVSEKPETEAVVKEKLAALQKMWTELET
TTQTKAQCLFDANKAELFTQSCADLDKWLVGLEGQIQSDDYGKDLTSVNILLKKQQMLEN
QVEVRQREVEELQSQAHVLRQEGKDTDEVDGRRKVVELKFQELLEPLLKRKDFLMASREI
HQFNRDMEDEILWVEERMPLATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRCDDIFDR
SQSILKADSPNVEAIQARLSDLQRLWSLIIQETEKRHTRLEEAHKAQQYYFDAAEAEAWM
SEQELYMMSEEKAKDEQSSVAMLKKHQILEQAVEDYAETVHQLSKTSRGLVAANHPESER
IGMRQSQVDKLYAGLKDLSEERRGKLEERFRLFQLNREVDDLEQWIAEREVVAGSHELGQ
DYEHVTMLQERFREFARDTGNIGQERVDGVNRMADELINAGHADAATVAEWKDGLNEAWA
DLLELIDTRTQILAASFELHKFYHDAKEILGRILDKHKKLPEELGRDQNTVETLQRMHTT
FEHDIQALGTQVRQLQEDAVRLQSAYAGDKADDIQRREGEVLEAWRSLLEACEGRRARLL
DTGDKFRFFSMVRDLMLWMEDVIRLIETQEKPRDVSSVELLMNNHQGIKAEIDARNDSFT
ACIELGKSLLARKHYASEEIKEKLLQLTDKRKDMIDKWEDRWEWLRLILEVHQFSRDAGV
AEAWLLGQEPYLSSRELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVR
RQQEEEERRRKPPTPEPVQAQDAETQQREGEQIAQNGLPSDQDSPRDGVEGEMNGVAERS
SKEPSPIPSPSAERRAKGSQSATLPAKGQETPSAQLEGLLHRKHEWEGHNKKASSRSWHN
VYCVINNHEMGFYKDNKSAAQGIPYHSEVPISLKDAVCEVAVDYKKKKHVFKLRVTDGNE
YLFQAKDDEEMNTWIQAIQNAGSGSSSSEKSEITPSNQSTPASSRAHTLPATVTLTTESS
PGKREKDKEKDKEKRFSLFSKKKQ
NT seq
6735 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatccactgtctggagaacgtggacaaggccctgcagttcctcaaggagcagcgc
gtgcatctggagaacatgggctcacatgatatcgtcgacggaaaccaccgactcacgctc
ggactcatctggaccatcatcctccgcttccagatccaagacatcagcgttgagacagaa
gacaataaggagaaacgctcagccaaggacgccctgctcctgtggtgccagatgaagacc
gcaggctatcccaacgtcaacatccacaacttcaccaccagctggcgagatggaatggct
ttcaacgccctcattcacaaacacaggccagacctgattgatttcgacaaactgaagaag
tccaacgctcactacaatctgcagaacgccttcaacctggccgagcagcacctgggtctc
accaaactcctggatccagaagatatcagcgtagaccatcccgatgagaagtctgtcatc
acttatgtcgtcacgtactaccattatttctccaagatgaaggccctgaaggtggagggc
aaacgtatcggaaaggtgctcgacaacgccatcgagaccgaaaagatgatcgagaaatat
gaatctctggcgtctgatctgctggagtggatcgagcaaaccatcatcatcctcaacaac
cgcaagtttgccaactctctggttggagtccagcagcagctgcaggccttcaacacttac
cggacagtagagaaaccaccaaaattcactgagaaaggcaacctggaagtgcttctgttc
accatccagagcaagatgagggccaataaccagaaagtctacatgccacgagagggaaaa
ctcatctcagatatcaacaaggcgtgggagcgtctggagaaggctgagcacgagcgtgag
ctggcgctgaggaccgaactgattcgacaggagaagctggagcagctcgccagacgcttc
gaccgcaaggctgccatgagggagacctggctgagcgagaaccagcgcctcgtttcccag
gataatttcggattcgacctccaggcggtcgaggcagctaccaaaaaacacgaagccatc
gagacagacatcgcggcgtacgaggagcgcgtgcaggcggtggtagccgtggccagagag
ctggagacggagaactaccacgacatcaagcgcatcgccgcacgcaaagacaacgtgttg
cgtctgtgggagtatctgctggagctcctgaaagctcgcagacagcggctggaaatgaac
ctcggcctgcagcgcgtcttccaggagatgctctacatcatggactggatggacgagatg
aagatgctgctgctgtctcaggattacgggaagcatttgttgggagtggaagatctgctg
cagaaacacgctctggtggaggctgacatcggcatacaggccgaccgcgtcaaagccgtc
aacgccaacgcacagaagttcgccgtggatgaggagggctacaaaccctgtgaccctcag
gtcatccgtgatcgcgtggcccacatggagttctgctaccaggaactgacccagctagca
gctgaacgccgcgcccgcctagaagagtcccgtcgcctctggaagttcttctgggagatg
gcagaggaagagggctggattcgtgagaaagagcagatcctgtcctcagacgactgcggt
aaggatctgacgggcgccgtgcgtctcttgagtcaacaccgcgctctcgaggacgaaatg
agcggccgagccggtcacctccagcacactgtgcgcgaaggtcaagctatggccgacgcc
gggcacttcggcgaagctaagattcgtgaacgtatcgcagacgtccaagcccaatgggcc
gctctggaacagctagctgcggtgaggaaaaagcgcttggaagaggcttgcagccttcac
cagttccaggccgacgcggacgatgtcgacgcctggactttggacgcgctccgaatcgtc
tccaccgctgacgttggccacgatgaattctccactcaagctttggtcaagaaacacaaa
gacgcgtcgactgaggtggctagttatcgcccggtgatcgacgcccttcacgaacaggcc
cagtccctgcctcccgaacaggtgcaggctgcgaacgtcaacgaacggctggcgggcatc
gaggagcgctataaggaggtctcggagctcaccaggctgaggaaacaggccctgcaggat
gccctggcgctctataagatgttcagcgaggcagatgcttgtgagctctggattgatgag
aaggagcagtggctcaacagcatggagatcccagagaaactggaggaccttgaggtcatt
cagcacaggtttgagagtctggagcctgaaatgaataaccaggcgtcacgtgtggccgtt
gtcaatcagatcgccaggcagctcatacacaacggacaccccagcgagaaagacatcaaa
gcccaacaagacaaactcaacaccaggtggagtcagttccgcgatctggtggaccagaag
aaagagtccctaaactcagctttgggcgtgcagaactaccacctcgactgtaacgagacc
aaatcctggatccgcgagaagaccaaagtcatcgagtccacccaggagctgggcaacgac
ctgacgggcgtaatggccctccagcgcaagctcaccggcatggagcgcgatctggccgcc
atcgaagccaaactgggcgacctccgcggagaggcggagcgcttggccggcgaacacccc
gaccaggccaaagccatcacgggacggctggcggagatcaccgccgtttgggaggagatg
aaagaaaccctacaaaaccgtgaggcgtctctcggggaagccagcaagctgcagcagttc
ctccgtgagctggacgatttccagtcgtggctttcccgcacgcagacggccatcgcgtcc
gaggacatgcccaatacgctagccgaggccgagaagcttctggcccagcacgaaggcatc
aagaacgagattaacaactacgaagaggactaccagaagatgagggacatgggcgagatg
gtgacgcagggacagacggacgctcagtacatgttcttgagacaaaggctccaggctctg
gataccggatggaacgagctccacaagatgtgggagaaccggcagaaccttctgtcgcag
tctcacgcctatcagatcttcctcagagacaccaaacaagccgaggccttcctcaacaac
caggagtatgttttggcccacaccgagatgcccaccacccttgaaggagccgaagctgct
attaagaaacaggaggacttcatgaccaccatggacgccaatgaggacaagatcaatgga
gtggtggaggccggaaggagactggccagtgacggaaacatcaatgctgaccgcatccag
gagagagcagcctccatcgacgacaggcataagaagaaccgtgaggcagccgtggagcta
ctaatgaagctgaaggacaacagagacctgcagaagttcttgcaggactgccaggagctt
tctttgtggatcaatgagaagatgttgacagcacaggacatgtcctacgatgaagctcgc
aacttacacagcaaatggctcaaacatcaggccttcatggcagaactgcagtccaacaaa
gaatggctggacaaaatcgagaaggaagggaagcagctggtctcagagaagccagaaaca
gaagccgtagtaaaagaaaagctggcggcgctgcagaagatgtggaccgaactagaaacc
acgactcagactaaagcccaatgtctgtttgacgcaaacaaagccgagctcttcacccag
agctgcgctgacctcgacaaatggctggtgggtctggagggtcagatccaatcggacgac
tacggcaaagatctgaccagcgtcaacatcctgctcaagaaacaacagatgttggagaac
caggtggaggtgcgtcagagggaggtggaggagcttcagtctcaagctcacgtgttgaga
caggaaggaaaggacacggacgaggtggatggacgccggaaggtggtggaactgaagttt
caggagctgctggagccgttgctgaaacggaaggacttcctcatggcctctcgtgagatt
catcagtttaaccgtgacatggaggatgagattctttgggttgaggagcgaatgcctctt
gctacgtcaacagaccatggccacaatttacagaccgttcaactgcttatcaagaagaac
cagacattacagaaggagatccaaggccatcagccgcgttgtgatgacatattcgatcgc
agccagagcatcctgaaggccgacagccccaacgtggaagccatccaagcacgtctgtcc
gatctgcagcggctgtggagcctgatcatccaggagacagagaaacggcacaccagactc
gaggaggcccataaggcccagcagtactactttgatgcagctgaagctgaagcctggatg
agcgaacaggagctctacatgatgtctgaagagaaggccaaggatgagcagagttcagtg
gccatgctgaagaaacaccagatcctggagcaagcggtggaggactatgctgaaactgtg
caccaactgtccaagaccagccgaggcctggtggctgccaaccaccccgagagtgagagg
atcggcatgcgtcaatcacaggtggataagctgtacgctggactgaaggacctatcagag
gaaagaagaggcaaactggaggagaggttccgcctcttccagcttaacagggaggtggat
gatctggagcagtggatcgcagagagagaggtggtggctggatctcacgagctcggacaa
gactatgaacacgtcactatgttgcaggagcgcttccgtgaatttgctcgcgacacagga
aacatcggtcaggagcgtgtggacggcgtcaaccgcatggctgacgaacttatcaacgcc
ggtcacgccgacgccgcgactgtggccgagtggaaggacggtctgaacgaggcctgggcc
gatctgctggagctcatcgacacacgcacgcagattcttgcagcatccttcgagctgcac
aagttctaccacgacgccaaggagattctgggccgcatcctggacaagcataagaagctt
ccagaagagctgggccgagaccagaatacagtggaaaccttgcagaggatgcacaccaca
tttgaacacgacattcaagctcttgggacgcaggtcaggcagctgcaggaagacgccgtg
cgcctgcagtcagcgtatgctggagacaaagccgacgacatccagcggcgtgaaggcgag
gtgctggaggcctggaggagtctgctggaggcctgtgagggccgaagggcgcggctgctg
gacaccggagacaagttccgcttcttcagtatggtgcgggacctcatgctctggatggag
gatgtcatccgccttatcgagacgcaggagaagcccagggacgtgtcgtctgtggagctt
ctcatgaacaaccatcagggcatcaaggctgaaatcgatgcccgtaatgacagttttacg
gcctgcatcgagctgggcaaatctctcctggcaaggaaacactatgcatcagaggagatc
aaagagaagttgttgcagttgacggacaagaggaaagatatgattgacaagtgggaagac
agatgggagtggcttagactgattttggaagtgcaccagttttcacgggacgccggcgtg
gcagaggcgtggttgctgggacaggagccgtacctgtccagcagagagttgggacagagt
gtggacgaagtggagaagctgatcaagcgtcacgaagcgttcgagaagtcagccgcgact
tgggaggaacgtttctctgcgctggagcgactgactacgttggagttattggaagtgaga
agacagcaagaggaggaagagaggaggaggaaaccgcccacgccagagccggtccaggcg
caggacgcagaaacacagcaaagagaaggagagcagattgcccagaatggactgccatca
gaccaggactctccacgggatggagtggaaggagagatgaacggagtggctgagaggagc
tcgaaggagcccagtcccatcccgtcaccgagcgcagagagacgagccaaaggcagtcag
tcggccacactgccggccaagggacaggagacgccgtctgcgcagctggagggattgctg
caccgcaaacacgagtgggagggacacaacaagaaagcatccagcagatcctggcataac
gtgtactgcgtcatcaataaccacgagatgggcttctacaaagacaacaagagcgcggct
cagggcatcccgtaccacagcgaggtccccatcagcctgaaggacgccgtttgcgaggtc
gccgtcgactacaagaagaagaagcacgtcttcaagctcagagttactgatggaaatgag
tatctcttccaagccaaagatgatgaggagatgaacacatggatccaggccattcagaac
gccggcagcggctcttcgtcctccgagaaatcggaaatcacacctagcaaccagagcacg
cccgcctccagccgcgcccacacgctcccggcgaccgtcaccctcaccaccgaatccagc
cccggcaaacgcgagaaagacaaagagaaagacaaggagaagcgcttcagcctcttcagc
aagaagaagcagtag
DBGET
integrated database retrieval system
