Garra rufa (doctor fish): 141293863
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Entry
141293863 CDS
T11039
Symbol
lima1b
Name
(RefSeq) LIM domain and actin-binding protein 1 isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
grf Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
grf04812
]
141293863 (lima1b)
Cytoskeleton proteins [BR:
grf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
141293863 (lima1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
141293863
NCBI-ProteinID:
XP_073682032
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All DBs
Position
20:27925867..27952441
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AA seq
734 aa
AA seq
DB search
MDVGPFSRKQWASQSLRITAKELSLVGSRGKNNAITERFSKYQKAAEEASAEKKKSSVDS
VHLRSGTLSVLKKRWEQTHQEKPAPQLSVAPVSLKAQSASSKPSNPPEPPASSRKLMRQP
SLTQESSSHERPAKIKADMETKQKKCAKEEEENKTPSDPCSPVEKPTLPLNNLKMMYEKG
ISKVQTEANCSSEDVDTQLGNKGTPSLKRSGSIKDRMAKYQLAVSRQASFTVACTASQSE
TEESVPCMDHKEIPPSAGDGQKVSTLPKSNCTKINGEHVQTTNPSAATPVSENKDLLKVA
RKFNMPTQERCVSCQKTVYPLEKLVANQQIYHKTCFRCAFCSTKLSLGTYASLHGNIYCK
PHFSQLFKSKGNYDEGFGHRPHKEMWTPQTNEEKPEGGEISKPFMADSVPTEQLNPRVEE
LRLAKSTDLTAALETKSQMTSSTDKPQTTSVETRKLRVAWPPPADSDGSSKVSSPATEVG
KGSSKLFRAKWPPEEEAPPAQQSPERAELKSLRRSSSLKERSRPFSVAPSLALSNASKQD
AQSSQKVALVRRGSLEELRTRSKVKAEKTEVKKEAEIPDEKTKDSGSQSKENIGSSAKLD
KKEEMPSSILKQTQQTKKEVEPQQTKNEADLQQTNEKSQTQLTKKEPELQKQEVPKGCVE
DEEKPVKCLSTSPELQSSQDTSSPPVEEKAHRTSQDVGFWDGEEAEESLTVEEMIKRNRY
YEDEEDEEEEVAIV
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggggccatttagcagaaaacagtgggcatcacagtcattacggatcacagcc
aaagagctctcattggttgggagccgtggcaagaacaatgccatcactgaacgtttttcc
aaatatcagaaagctgctgaggaggcaagtgcagagaagaaaaaatcatctgttgacagt
gtgcatctccgatcaggaactctgagtgtactgaagaaacggtgggaacagacacatcag
gagaaacctgctcctcagttgagtgtggcacctgtgagcctgaaagctcagtctgcttcc
agcaaacccagcaatcctccagaaccacctgcttcctcaagaaaactcatgcgacagccc
agcctgacccaagagtcatcctcccatgagagacctgcaaaaataaaagcagacatggag
actaaacaaaagaagtgtgcaaaagaagaggaagaaaacaagactccatctgatccatgt
tctcctgtggaaaaaccaaccttgccccttaataacctcaaaatgatgtatgaaaagggc
ataagcaaggtgcaaacagaagcgaactgcagctcagaggatgtggacacacaattgggc
aacaaaggtacacccagtctgaagcgcagtggctctatcaaggacaggatggcgaaatat
caattagcggtcagcagacaggcttcttttactgtggcatgcactgcaagccagtcagaa
acagaggaaagtgttccctgcatggatcataaggaaattccgccatctgctggtgatgga
cagaaagtgagtacactccccaagtcaaactgtacaaagatcaatggagagcatgtccaa
acaacaaatcccagtgctgcaactccagtatcagagaacaaggaccttcttaaagtggcc
aggaaatttaatatgcctactcaggaaagatgtgtgtcctgccaaaagactgtttaccca
ctggagaaactggttgccaatcagcagatttaccacaagacttgcttccgctgtgccttc
tgtagtaccaaactcagtttggggacttatgcttccctacatggcaacatctactgtaaa
cctcacttcagccagctatttaagtctaaaggcaactatgacgagggctttggtcatcga
ccacacaaggaaatgtggacaccacaaacaaacgaggagaaacctgagggaggtgaaatc
tcaaagcccttcatggcagactctgtgcctacagaacagttgaaccctagagtggaggag
ttacgactggccaaatccactgatctgactgcagctctagagacaaaaagtcaaatgacc
agctccacggataaaccacaaaccacttctgtggaaacaagaaaacttagagtggcttgg
ccacctcctgcagacagtgatggaagctccaaagtctccagtccagccactgaagttgga
aagggttcatccaagcttttcagagcaaagtggcctcctgaggaagaagctccacctgct
cagcagagccctgaaagagcagaactgaaaagtctgcggcgtagttcctcactcaaagag
cggagccgtcccttctctgtggcaccaagcctggcattatccaatgcatcaaaacaagac
gctcaatcgtctcagaaagttgctttagtcagacgaggctcgctggaggagcttcgtaca
cggtcaaaagtaaaagcagaaaaaactgaggtgaaaaaagaggcagaaatcccagatgaa
aagacaaaggacagcggcagccaatccaaagagaatattgggagttctgccaaacttgat
aagaaggaagagatgccctcttctattctcaagcagacacagcaaacaaaaaaggaggtt
gagccacaacaaacaaaaaatgaagctgatctacaacaaacaaatgaaaagtctcagact
caactaacaaaaaaggagcctgagctgcaaaaacaggaagttccgaaaggttgtgttgaa
gatgaggaaaaaccagtgaaatgcttaagcacttctcctgaactccagtcttcccaagac
acatcgtctccacctgtggaagaaaaagcccataggacatcccaggatgtgggattctgg
gatggtgaggaggctgaagagtccctgactgtagaggagatgattaagaggaatcgctac
tatgaagatgaagaagacgaggaggaggaagtggcaatagtttga
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