Garra rufa (doctor fish): 141293895
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Entry
141293895 CDS
T11039
Symbol
sort1a
Name
(RefSeq) sortilin
KO
K12388
sortilin
Organism
grf Garra rufa (doctor fish)
Pathway
grf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
141293895 (sort1a)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
141293895
NCBI-ProteinID:
XP_073682069
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Position
20:9241336..9276288
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AA seq
817 aa
AA seq
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MSTVFCCVLVVLFSVALCKDFEERPSSSSSRRSEQTMFLKSHKSRNLLSLKALQQPDYGR
MKRSEESAQNRCEALHGYDSTLKNNTHTYNFNDLSGSVSLAWVGDGTGVLLVLTTFQVPL
FIMRFGQSRLYRSEDYGKTFQDITDLINNTFIQTEFGIAIGPENSGKVILTGDLTEGRVT
KIFRSVDFGKTFVTSELPFHPLMQITYNPRDSNILMVYSINYDLWLSEDFGANWRKIHET
VCLVKWGIDDTIFLTTNPNGSCSDRGTLELRKSLDYGKTFKTIGGRIYSFGLGGRFVFAS
VMTDSGSTRMIHVSVDQGETWDMAQLPIVGHEQFYSILAANSDMVFMHVDEPGDSGIGTI
YVSDDRGIVFSKSLERHLYTTTGGDTDFTNITSLRGVYMTSVLAVDGSVQTVITFNQGGE
WRPLLKPWNGVCDSTTEHPDKCSLHIHASYSISMKLNVPMQPLSEPNAVGLILAHGSVGG
AVSVLSPGVYVSDDGGYTWFQALKGPHHYAILDSGGLLVAVEHNPSHPISQIKFSTDEGQ
CWHVYNFTDDPIYFTGLASEPGARSMNVSLWGYRETVLNQYWVSVTVDFRQLISRDCQET
DYIQWLAHSNDISDPADGCVLGYKERFLRLRKDSVCWNGRDYMVSKDPTTCPCTLTDFQC
DFGFYHAENSSVCVEQPDLIGHSLEFCLHGRKEQLQTSGYRKIPGDHCEGGITPERKEID
LSKKCVSNLLRTELLTEEHSFNLAPIVAVVIAVLLISAVAGVIFIKKYVCGGRFLVHRYS
VLQQHAEANGIDGVDDLDTLEAGKTHYHDDSDEDLLE
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgtattctgctgtgttttggttgttttattctcagtggctctttgcaaggac
tttgaagagagacccagcagcagcagctccaggaggagtgagcaaaccatgtttctaaag
agtcacaaatcacgaaatctgctcagtttgaaagctttacagcagccggactatggcagg
atgaaaaggagtgaagaatccgcacaaaatcgatgtgaagcacttcacggctatgattca
acgttaaaaaacaacactcacacgtataacttcaatgacctgagtggctctgtgtctctg
gcctgggttggagacggcacaggggttctgctggtgctgaccacattccaggttcctctt
tttatcatgcggtttggtcagtccagactgtacagaagtgaagactatggaaagacattc
caggacatcaccgaccttattaacaacaccttcatacagacagagtttggcatcgcaatt
ggtcccgaaaattcagggaaggtgatcctcacaggtgatctaactgagggaagagtcacc
aaaattttccgttcggttgatttcggcaagacctttgtgacctctgagcttcccttccat
ccgttaatgcagatcacatacaaccccagagacagcaacatactcatggtctacagcatc
aattatgacttatggctgtctgaagacttcggggccaattggagaaagatccatgagact
gtttgtcttgtgaaatggggaattgatgacactattttcttaaccacaaaccccaatgga
tcctgcagtgaccggggaacacttgaattgagaaaatctttagactatggcaaaacattc
aaaaccataggaggcaggatttattccttcggcctgggtgggcgctttgtttttgcctca
gtcatgaccgactcgggttccacacgcatgattcatgtctcagtagatcagggggagacg
tgggatatggctcaactccccattgttggacatgagcagttctactccattctagccgca
aacagtgatatggtcttcatgcacgtagacgaacctggagactccggtattggtacaata
tatgtgtcggatgaccgaggcatagtgttttccaagtctctggaacgccatttgtacacc
actacaggcggagacactgacttcaccaacatcacttctctgagaggtgtatatatgacc
agtgtgctcgccgtggatggctctgtccagacagtgattacatttaatcaaggtggagag
tggcgaccactgctgaaaccctggaacggagtttgcgactccacaaccgagcacccagac
aagtgtagtctgcatattcatgcctcctacagcatctctatgaaactaaatgtgcccatg
cagcccctctcagagcccaatgccgtgggactcatcctggcacatgggagtgtgggaggt
gcggtttctgtgctttctccaggcgtgtatgtgtctgatgatgggggttacacatggttt
caggcactgaaaggcccccatcactacgctatactggattcaggaggactgctggtagcg
gtggagcacaacccctcacaccccatatcacagatcaaattttccactgatgaaggtcag
tgttggcatgtgtataacttcaccgatgatccaatatactttactggcctggcatcagaa
cctggtgcccgttccatgaacgtcagcctgtggggctacagggaaaccgtcctgaatcag
tactgggtttctgtcactgtcgacttcaggcagttgatctctagagactgtcaggagact
gactacatccagtggctcgctcactcaaacgatattagcgaccctgctgatgggtgcgtg
ctgggatacaaggaaaggtttttacgcttacgaaaggactcagtctgctggaacgggcgg
gattacatggtcagcaaggatcccacgacatgtccctgcaccctcactgactttcaatgt
gactttggattctaccatgcggaaaacagctctgtgtgtgtggaacagcccgaccttatt
ggccattcgctggagttctgcctgcacggacgcaaagagcaactccagaccagcggttac
cggaaaattcctggggatcactgtgaagggggaataactccagaacggaaagagatcgat
ctgagcaagaaatgcgttagtaatttgctgaggacagagctactgacagaagaacattca
ttcaatttagctcctatagtagctgtggtcattgctgttctgttgatcagtgctgttgcc
ggagttattttcattaaaaaatatgtctgtggaggaagattcctagtgcacaggtactct
gtattacagcagcatgctgaagctaacggtatcgatggtgtggatgacctggacacattg
gaggctggcaagacgcactaccatgatgattcagatgaggacctcctagagtga
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