Garra rufa (doctor fish): 141293962
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Entry
141293962 CDS
T11039
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf02010
ABC transporters
grf04148
Efferocytosis
Brite
Transporters [BR:
grf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
141293962 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
141293962
NCBI-ProteinID:
XP_073682135
LinkDB
All DBs
Position
20:41761921..41796140
Genome browser
AA seq
2335 aa
AA seq
DB search
MAIGTQLYLLLWKNFTYRRRNKVQLIIELLWPLFLFLILIAVRQSHPPYKQSQCHFPNKA
LPSAGTLAWVQGIICNVNNPCFHHPTAGETPGRVSNFDNSTLSRLLVDLRAVLAISGNRT
VLSGLQDLSQALQRLGERPDAWPNLPVREYLRANESFSSFLRTNTSIPSSSVDQLLRARL
NLQVVALSGGGMRLSDIVCNSSLLGRYLTVKDGDSFPELQGALCAVPSDVMQKIEQIFLS
QLDFSKILSRDRLQANAADLRLISRAVSSVSQELASVMDDISSLSSFSELNSEMRLLTSE
NRSALPRESFRAFSRIMCGHPEAGGERIPSFNWYEDQDIKSFLGRNASQETDLEKDNSTT
PFCENLIRSLESNPLSRIVWRSIKPLFIGKLLFTPDTPLTRSLMSEVNRTFQDFQILNDM
QEAWLEVGPRIKTFMESSVEIRLLQDLLKRPEVAVVVNLRLENTSWTASRISRFLSTPDP
DSPRRDGAPLTWLDLYQDLNNTFSALSELTTCFSLNKVEGLSTEGEMVERALELLEDRQF
WAGIVFLLPDPSSSSLPPHVKYKIRMDIDDVTRTNKIKDKFWDPGPAAEPFSDLRYVWGG
FVYVQDLVERAVTRLLAGKEPKMGIYVQQMPYPCFVDDVFIRVLNRSLPLFMTLAWIYSV
AMIIKAVVFEKEARLKETMRIMGLSSGMLWLSWFISSYLPFLFSAGLLIAALKWGDILPY
SDPAVVFFFLAAFATATIMLCFLISTFFSRANLAAACGGLIYFTLYLPYVLCVAWREHLT
STHRILASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLRSSPMEGDTYNFTISIVMLYADA
VIYALATWYIEAVLPGQYGIPRPWYFIFQLNYWGGVPLEVGLPVPPAPRDESDDRIEAEP
TDLILGVSIRNLVKIYKKGAKLAVNHLNIKFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TAGTIYVKGMDIRTDMDVIRRTLGVCPQHNVLFDILTVEEHVWFYGRMKGMSMGEVKKEI
DSLLQDVGLQHKRYEQTKNLSGGMQRKLSVAIAFIGGSKVVVLDEPTAGVDPYSRRGIWD
LLLKYRQGRTIILSTHYMDEADLLGDRIAIISQGKLCCCGTPLFLKARLGTGYYLTLVKK
EMHSTPSSTSTAKLPLAAVTKDSDSSLSDDTGLGSEENGFNVAAVMALAQQYVPDAQLVE
DIGREAVINLPHAASEDGSLALFLNELDKRQGEFGVVSYGLSDTTLEEIFLRVAEETGVD
ADPEEPAVSPGHQGAPSEDRDAGRNQPIRREAQETEPLSGDGQGGGAPLTGCFLTCQQLR
ALFTKRLKYALRSRRGIFAQIVLPAVFVLIALLFSLIVPPFGKYPSLELQPWMYGEQFTF
FSNDAPQDPAVQNLLDALLNPPGFGTKCMEPSGDAECLEEFETKFVRPQIPYSMWQLLHK
GNWTAEKPSLDCECSSEEIRRMLPDCPEGAGGIPPPQIKQMTGDVLQNLTGRNISDYLIK
TYPQILKKSLKTKKWVNEFRYGGFSLGAKSSQAVDDPQHLEESVLAIRRRYNIAENSSLD
QLLHRLPDVLMGLSSQNNVKVWFNNKGWHAMASFVNIMNNGLLRANLPPGVERRKYGITA
YNHPLNLTKEQLTEMALMTTSVDVLVSICVIFAMSFVPASFVLFLIEERVSKSKHLQFVS
GVKPILYWTTNYIWDLLNYTVPATMVVFIFISFQQESYVSEKNLPALVLLLLLYGWSITP
LMYPASFIFSIPSTAYVVLTSINLFVGINGSVATFVLELFVDEHLNEVNRILKKVFLIFP
HFCLGRGLIDMAKNQAMADAFQRLGTQQNLEPLSWDFVGKNLFAMAMEGIVFFIFTVLLQ
YKFFVNLSRWSGFVLPPLGTEDEDVARERERVKSGRAVGDILILKDLSKVYKAGRKPAVN
RLCLGIPRGECFGLLGVNGAGKTSSFRMLTGDTRITYGEAFLRNHSVLTEMEKVHQLMGY
CPQFDAISDLLTGREHLEFYARLRGVPEAHVAKVAQWGVQKLGLSQYAEREAGGYSGGNK
RKLSTAISLIGAAPVIFLDEPTTGMDPKAKRFLWNCILSVIKEGRSVVLTSHSMEECEAL
CTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLSTPSTEPCPVDTFIHNSFPGIQLKE
RHQNVLQYQLPSQACSLARVFEVLSNNYEELGIADYSVSQTTLDQVFVNFAKEQTDDDQL
REVTVNGGESTAIQTNRPQRPTDLKLQKSSRSSTPRSPSDQATHSVQSPEPSSTGSKTKK
SKSNSPSVFGPQQQIRMEPVGEAANGSNPCRDQTPGKKDPSALFIISTKTQESKV
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccattggaacacagctctatctgctgctctggaaaaacttcacgtaccgcaggaga
aacaaggttcagctgatcattgaactcctgtggccactcttcctcttcctcatcctcatc
gctgttcgtcagtcacacccgccgtataaacagagccaatgtcattttcccaacaaggct
cttccatcagcaggcacgctggcatgggttcagggcatcatctgcaacgtcaacaacccg
tgttttcatcaccccacggcaggagaaacacccgggcgagtgagcaacttcgacaactcc
acactctctcgactgttagtggatttgagagctgtcctggcgatcagcggtaaccggacg
gttctctcgggtctgcaggacctatcgcaggccctccagagactcggggaaagaccagat
gcctggccaaatcttccagtaagagagtatctcagagccaatgaaagcttctcctccttc
ctgcggacaaacaccagcatcccttcatcatcggttgatcagttactgagggcacgactc
aaccttcaagtggtcgcgttatcaggcggaggaatgcgtctgtcggacatcgtctgtaac
tcgtctctgctgggtcgctacctcaccgttaaagatggagattctttccctgaactgcag
ggggcgctgtgtgctgtgccttcagacgttatgcagaagatagagcagatcttcctctca
cagctggacttcagcaagatcctttcgagagacagactgcaggcgaatgcggccgatctc
cggctcatcagtcgggccgtttcctctgtatctcaggaactagcatcagttatggatgac
atttcttctctgtccagtttctcagagttgaactcagagatgaggctcctgacttctgaa
aaccgctcagcactgccacgcgagagctttcgggccttctccagaatcatgtgcggacac
ccagaggcaggaggagagagaatcccttcattcaactggtacgaagatcaggacatcaag
tctttcctgggcagaaatgcatcgcaggagacagaccttgagaaggacaacagcaccact
cccttctgtgaaaaccttatacgaagcctggagtcgaaccctctgtcacggattgtgtgg
cgaagcatcaaaccgctgttcattgggaagctgctctttactccggatacgccgctcacc
cgttcgctcatgtctgaggtcaacagaacatttcaggacttccagatcctgaatgacatg
caggaggcgtggctggaagtgggtcccagaatcaaaaccttcatggagagcagtgtggaa
atccggcttctgcaggatcttctgaaaaggcctgaggtggcagtagttgtgaatctacgt
cttgaaaacacctcttggacggcctctcgcatctcccgctttctctcgacgcctgaccca
gattctccccgtagggatggcgctccgctcacctggttggatctgtaccaggatttgaac
aacaccttcagcgctctctcagagctcaccacgtgcttctctttgaataaagtggagggt
ctgtcgacggagggtgagatggtggagcgagctctggagctgctggaagatcgtcagttc
tgggctggaatcgtcttcctccttccagacccctcgtcatcctccctgcctcctcacgtc
aagtacaagatccgcatggacatagacgacgtcacccgcacaaacaagatcaaagacaaa
ttttgggatccaggcccggctgccgaacccttcagtgacctccgctatgtttggggtgga
tttgtttacgtacaggatttagtggagagagctgtgacgcgtttgctggccggtaaagag
ccaaagatgggcatatatgtgcagcagatgccttacccgtgctttgttgatgacgtgttc
atccgtgtgctgaatcgttctctgcctctgttcatgacgctggcgtggatctattctgtg
gcgatgatcattaaggccgtggtgtttgagaaagaggctcgtctgaaggagacgatgcgt
atcatgggtctgagctctgggatgctgtggctcagctggttcatcagcagttacctgccc
ttcctgttcagcgctggactgctgatcgccgctcttaagtggggcgatatcttaccctac
agtgacccggctgtcgtgttcttcttcctggctgcgtttgccacggccaccatcatgctt
tgtttcctcatcagcaccttcttctcacgagccaacctggcagcagcgtgcggaggactg
atttacttcaccctttacctgccgtatgtgctgtgtgtggcctggagagagcatctgacc
agcactcacaggatcctagcgagcttcctgtctccggtagcctttggctttggctgtgag
tatttctcccagtatgaagagcagggtgtgggcatccagtggtttaacctgaggtcaagc
cctatggagggagacacctacaacttcaccatctccattgtgatgctgtatgcagatgct
gtcatctatgcactggccacttggtacatcgaagctgttcttccagggcagtatgggatc
cccagaccgtggtattttatcttccagctgaattactggggtggggttccattagaggtg
gggttacctgttcctccagcacctagagatgaatcagatgatcggattgaagctgaaccg
acggacctaattctgggagtgtccataaggaacttagtgaagatttataaaaagggggcc
aagcttgctgtcaatcacctgaacataaagttctatgagggccaaataacgtcttttctg
ggtcacaatggagctggcaagacaaccactatgtccattctgacaggactgtttcctccc
actgctggtacgatatacgtgaagggaatggacattcgcacagatatggacgtgatccgc
aggactctgggagtttgtcctcagcacaacgtcctctttgacatcctgacggtggaggag
catgtgtggttctacggtcgaatgaagggcatgagcatgggggaggtcaagaaggagata
gattcgcttctgcaggatgtgggcttacagcacaaacgatacgagcagaccaaaaacctg
tcaggtggcatgcaaaggaaactgtctgttgcaatcgctttcataggcgggtcaaaggtc
gtagtcttggatgagcccaccgctggtgtggacccctactctcgccgcgggatttgggac
cttctgctcaaataccgtcaaggccgcaccatcattctgtccacgcattacatggatgaa
gccgacctcctcggtgaccgcatcgcaatcatttctcagggaaaactgtgctgctgcgga
actccgcttttcctcaaggcacgtcttggtactggatactatcttacgctggtcaagaaa
gagatgcatagtacacccagcagcaccagcactgccaaactccctttagctgcagtgact
aaggacagcgattcctcactaagcgatgacacaggactgggcagcgaagagaatggattc
aacgtggccgccgtaatggctcttgcacagcagtacgtccctgacgctcagctggtggag
gatatcggcagagaggcggtcatcaacttgccccacgctgcctcagaggacggcagtctc
gccctcttcctgaacgaactggacaaacggcagggcgagttcggcgtagtcagttatggg
ttgtcagacaccacattagaagagatctttctgcgtgtggcagaagagacgggtgtggac
gcggaccctgaggagccagcagtgtctccgggccaccagggggcgccgtctgaggataga
gacgcaggacgaaatcagccaatcaggagagaggcccaggagacggagccgctgagtggg
gatggtcagggtggcggtgctcctctaacgggctgcttcctcacatgtcagcaacttcga
gcgcttttcaccaaaagactgaagtacgcccttcgcagtcgcagaggcattttcgctcag
attgttcttcctgcagtttttgtccttatcgctctgctcttcagtctcattgttccaccg
tttgggaaatatccatccctggagctccagccatggatgtacggggaacagttcactttc
ttcagcaatgatgccccacaggatccagccgtacagaacctcctggatgccctgctgaat
ccacccgggtttgggaccaaatgtatggagccgagcggagacgccgagtgtttagaggaa
tttgaaaccaagtttgtccgaccacagatcccctacagcatgtggcagctccttcataaa
ggcaactggactgcggagaagccgtctcttgactgtgagtgcagctctgaggagatccgg
aggatgctgccggactgtccggagggagcaggaggaatcccccctcctcagataaaacaa
atgacaggtgatgttctgcaaaatttgacaggccgcaacatttctgactacctcatcaaa
acatacccccagattctgaagaaaagtttgaagaccaaaaagtgggtaaatgaatttaga
tatggaggtttctctctgggagctaaaagctctcaagctgtagatgatcctcagcacctg
gaggagtctgttttggctattagaagacgctacaacattgctgagaatagttcattagat
cagctccttcacagacttccagatgtccttatgggactcagcagccagaataatgtaaag
gtctggtttaataataaaggatggcatgccatggcgtcgtttgtgaatatcatgaacaat
ggtctccttcgagccaacctgccacctggtgtggagagacgtaaatatggaataacagcc
tacaatcacccactcaacctcacaaaggagcagctgacagagatggccctgatgaccacc
tcagtcgacgttctggtgtccatttgtgttatttttgccatgtcgtttgttcctgccagt
tttgtcctgttccttatcgaggaacgggtcagtaaatcaaaacacctgcagtttgtgagt
ggagtgaagcccatcctctactggaccaccaactacatatgggacttgttgaactataca
gtaccagccacgatggtggtcttcatcttcatcagcttccagcaggagtcatatgtatct
gagaagaatctgcctgctctggtgctcctactcttgctgtacggttggtctatcactcca
ctcatgtatccagcctccttcatcttctccatccccagcactgcctacgtggtcctcacc
tccatcaacctcttcgtcggcatcaacggcagcgtcgccacctttgtcctggagctcttt
gtcgacgagcatctgaatgaggttaacaggatcctgaagaaggtctttctgatcttccca
cacttctgtctgggtcgaggtctgattgatatggccaagaaccaggccatggcagacgca
tttcagcggctgggaacccaacagaatctggagcctttatcctgggattttgtagggaag
aacctgtttgccatggccatggaaggaatcgtgtttttcatcttcactgttctcctgcag
tataaattctttgttaatttaagccgatggtcgggcttcgtgctgccgcctctgggcacc
gaggatgaggatgtggcgagagagagagagcgtgtgaagagcggtcgagcggtgggagac
atcctcatcctcaaagatcttagcaaggtgtacaaggcgggcaggaagccagcagtgaat
cggctttgcttgggcattcctcggggagagtgttttgggcttcttggtgttaacggggct
ggaaaaacctcatctttccgcatgctaaccggagacacccgcatcacttatggagaagct
tttcttagaaaccacagcgttctcacagaaatggagaaagttcatcagctgatgggctac
tgtcctcagtttgacgccatcagtgacctgctgaccggacgagagcatctcgagttctac
gctcgcctcagaggagtcccagaggctcatgtggcaaaggtggcacagtggggagtgcag
aagctgggtctgagtcagtatgctgagcgagaggctgggggttacagcggaggaaacaag
cgcaaactctccaccgccatttccctcattggagctgcacctgtcatcttcctggatgag
ccaacaactgggatggacccaaaggccaagcgcttcctctggaactgcatccttagtgtg
atcaaagagggacgatctgtcgttctcacctcccacagtatggaagagtgtgaggctctg
tgtacccgaatggccatcatggtgaacggcaggttccagtgtctgggctcagttcagcac
ctgaagaacaggtttggagacggctacacaataatcctccgtttgtccacgccgtctaca
gagccgtgcccggtggacaccttcatccataactccttccctgggatccagctgaaggaa
agacatcagaatgttcttcagtaccagctgccatcacaagcctgttcgctcgctcgggtc
tttgaggttttgtcaaataattacgaggagctggggatcgctgactactccgtgtcacag
actacactggatcaagtgtttgttaactttgctaaagagcagacagatgacgatcagctc
agggaggttacagtaaacggcggagaatccacggcgattcaaaccaatagacctcagcgg
cccacggacctcaaactccagaaatccagcaggtcttccactcctcgctctccttcagat
caggctactcactcagtacaaagccctgagccttcatcgactggttcaaagaccaaaaag
agcaaatcaaacagtccgtcagtctttggaccgcaacagcagatccggatggaacctgtt
ggcgaggcagctaacggatcaaacccctgtcgagaccagactcctgggaaaaaagaccca
tccgcattgtttatcatcagtaccaaaacacaagaaagcaaagtgtga
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integrated database retrieval system
