KEGG   Garra rufa (doctor fish): 141294059
Entry
141294059         CDS       T11039                                 
Symbol
rrp9
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2 isoform X1
  KO
K14793  ribosomal RNA-processing protein 9
Organism
grf  Garra rufa (doctor fish)
Brite
KEGG Orthology (KO) [BR:grf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:grf03009]
    141294059 (rrp9)
Ribosome biogenesis [BR:grf03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    141294059 (rrp9)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IP5PC_F Beta-prop_IFT140_1st Beta-prop_WDR75_2nd PEP5_VPS11_N Beta-prop_WDR19_1st WD_LRWD1 WD40_RFWD3 WD40_like Beta-prop_RIG_1st Ntox15
Other DBs
NCBI-GeneID: 141294059
NCBI-ProteinID: XP_073682241
LinkDB
Position
20:9309055..9319254
AA seq 472 aa
MSFFIKKKVIAAAVNKGDLKRKSNADDGKGRSKKFNKRMNEEISSDSENESGAPHRKQEN
EDDEIEETPQEKKLRLAKQYLDQLREEEDKTAENETFEADLIAGRLQDDVLEQKGKLQRM
IAKELIAPDSSEIRLLRGHKLSVTCLVISPDEKYIFSASKDCSIIKWEVESGKKVHKIAG
GRKGTEDRHVGHTAHILCMAISSDGKYLASGDMNKLIMIWDPMTCKHLYKFTGHKDAVSG
LAFRRGTHTLYSASHDRSIKVWSVEENAYVETLFGHQDNITGLDCLSRERCVTAGGRDRT
VRVWKIAEESQLVFNGHEGSIDCIQLINEEHMVTGGDDGTISIWTVNKKRPVSTVKQAHG
SHGNTGLEQPYWVSSVAALHNSDIVASGASCSHNSAVQLWKCGQGFRGLEPLFSVPMAGF
VNSLKFSNSGKFIVAGVGQEHRLGRWWRIKEARNGLYIIPLKRQAQEQVVVQ
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgtcgttctttataaagaaaaaggtaatcgctgcggctgtcaacaaaggagatttaaaa
agaaagagcaatgcagatgatggcaaaggcagatcaaaaaagttcaacaagcgaatgaat
gaagaaatatcgagcgactcggaaaatgaaagtggtgcgcctcacagaaaacaggaaaat
gaagacgacgagatcgaggagacgccgcaagagaagaaacttcgcctggccaaacagtac
ctggaccagctgagagaggaagaggacaagacagccgagaatgaaacatttgaagcggat
ctgatagctggaagactgcaggatgatgtgctggaacagaaaggcaaactgcaaagaatg
atcgccaaagaactcatagctccagattcatcagagatcaggttgttgagaggacacaaa
ctatctgtcacatgcctcgtcatcagcccagatgagaaatacatcttctcggcaagcaaa
gactgctccatcatcaaatgggaggtggagagcggaaagaaggtgcacaagatcgcagga
ggacgaaagggaacagaagatcgtcatgtgggacacaccgctcacatcctgtgtatggct
atatcatccgatgggaaatacctggctagtggagacatgaataaactcatcatgatctgg
gatcccatgacatgtaaacatctgtacaagtttacaggacacaaagacgctgtatcgggt
ttggctttcagacgagggactcataccctctacagtgcgtcacatgaccgctcaataaaa
gtgtggagcgtggaagagaacgcttatgtagaaaccctgttcggccatcaggacaatatc
accgggttggactgtttgagcagagagagatgcgtgactgcaggaggacgagacagaact
gttcgagtgtggaaaatcgctgaagaatcacagctggtttttaatgggcacgagggctcc
attgattgtatccaactaattaatgaagaacacatggttacaggtggagatgatggcact
atatctatttggactgttaataagaagaggccggtgagcacggtgaagcaagcccacggt
agccatggcaacacgggtctggagcagccctactgggtgtcatctgtggcggcgctgcac
aactctgacatcgtggcatcaggtgcctcatgctcccataattcagccgtgcagctgtgg
aagtgtgggcagggtttcagaggcctggagccgctcttcagcgtcccgatggctggattt
gtgaacagtctgaagttctcaaactctgggaagtttattgtggcaggagttggacaagag
cacagattgggccgatggtggagaataaaggaagctagaaacggactatatatcatccct
cttaaaagacaagctcaagagcaagttgttgtccagtaa

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