Garra rufa (doctor fish): 141294199
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Entry
141294199 CDS
T11039
Symbol
csf1a
Name
(RefSeq) macrophage colony-stimulating factor 1a
KO
K05453
macrophage colony-stimulating factor 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04010
MAPK signaling pathway
grf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
141294199 (csf1a)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
141294199 (csf1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
grf04052
]
141294199 (csf1a)
Cytokines and neuropeptides [BR:
grf04052
]
Cytokines
CSF and other factors
141294199 (csf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSF-1
EC042_2821
Motif
Other DBs
NCBI-GeneID:
141294199
NCBI-ProteinID:
XP_073682387
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Position
20:complement(18819628..18846237)
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AA seq
544 aa
AA seq
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MNTHITAHKAKVRHLCFFLILCFHLVYAGVPGPCKHSVTQDHLFNLRRLIKNQLQNGCSI
TYTFTERQNLSVVCYVKAAFPHILELLNTQFRYAKDSDNYRYTTSLKNLIYNIYSQRCIP
PINEEIEDSPMKFVRTHMTLPRAALEKAEEVIRMYMGLMTQSNKPVDWNCEEEYTEDYPE
STTEPFRQTAGASECPCICPTVSIGSSGTPASTSHWNIYLKSTPAPRRSSFSPVGTLQGG
NDRTKQFKAAVPVTKHQTLALGSPATRRPTQGDLSNFLFGSTPAFQEETSNSEMDHMPSL
NHFPSFTHLQDVFPSRTDSRVESTASGFYQKGTSESTQDGVEKSTPLLLAKRSLDSKSQE
GPSSSYVKLSQNTVTTISEPTYKDIKSTEIKDKPFQMLQLSKHIVPVTTTVMSSLKAAEH
SSESLNALVKQPGHLISPPKNFQTHTQTPMRVPRNFMRSIHEAKLSKDSISQDDRQETKD
YTHRYRETDRNSSTEQSSSTIITFGTVFIMTLGCGGLLLLTVLFYRQHRVSDAQLIFALL
KRPT
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgaacacacacataacagcccacaaagccaaggtaaggcatctgtgcttcttccttatc
ctgtgctttcatttggtgtatgctggtgtgccaggtccatgtaagcactcagtcacccag
gaccatctctttaatttaagacgtctgattaagaaccagctgcaaaatggttgttcaata
acctacacctttaccgaacgtcagaacctgagtgttgtgtgttatgttaaagcagcattc
cctcacatactggagctactcaacacccagttcagatatgcaaaggactcagacaattat
cgttatactacttcactgaagaacttgatctacaacatttactcccagagatgcatccct
ccaatcaatgaggagattgaggatagcccaatgaagtttgtaaggacccacatgactttg
cccagggcagcgttggagaaagccgaggaagtgattcgcatgtatatgggtctaatgact
cagagcaacaagcctgtggactggaactgtgaggaggagtacacagaagattacccagag
tccaccactgaacctttcagacagactgcaggtgcctccgaatgcccctgcatttgtcca
accgtgagcattggatcatctgggacacctgcatccacaagccattggaatatttacctg
aaatctactccagccccacgaagatcatccttttcacctgtgggaaccttgcagggtggc
aatgacagaactaaacaattcaaggcagctgtcccagtcaccaaacaccaaacactagct
ctagggtcgcctgcaacaaggaggccaacacaaggagatttatcaaacttcctctttggt
agcactccagcatttcaggaagaaacttcaaattccgagatggaccacatgccatcactg
aatcatttcccttcatttacacatctccaggatgtatttccaagcagaactgactcaaga
gttgagtcaacagcctctggcttctatcaaaaaggcacaagcgaaagcacacaggatggt
gtggaaaagagcacgccgcttttacttgccaagaggtctttggattccaaaagccaagaa
ggaccatccagttcctatgtgaaattatcacagaacacagttactacaatatccgagcca
acatataaagacataaagagcacagagataaaagacaagcctttccaaatgcttcaactg
agtaaacacattgtaccagtcacaaccacagttatgtcttctttgaaagcagctgagcat
tcatcagaaagtctgaacgcccttgttaaacagccaggtcatttaatcagccctcctaaa
aatttccaaacacacacccaaactccgatgagggtgccaaggaatttcatgagaagcatt
catgaggcaaagctcagcaaagacagcatatcccaagatgacaggcaggagacaaaggac
tatactcatcgatacagagaaacagacaggaactcttctacagagcaatccagcagtaca
atcatcacctttggcacagtattcataatgacattagggtgtggtggacttctgctctta
actgtcctgttttacagacagcacagagtaagtgacgcacaattaatttttgctctgctg
aaaagacccacttag
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