Garra rufa (doctor fish): 141295302
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Entry
141295302 CDS
T11039
Symbol
hmgcl
Name
(RefSeq) hydroxymethylglutaryl-CoA lyase, mitochondrial
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00280
Valine, leucine and isoleucine degradation
grf00650
Butanoate metabolism
grf01100
Metabolic pathways
grf04146
Peroxisome
Module
grf_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
141295302 (hmgcl)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
141295302 (hmgcl)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
141295302 (hmgcl)
Enzymes [BR:
grf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
141295302 (hmgcl)
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Motif
Pfam:
HMGL-like
Motif
Other DBs
NCBI-GeneID:
141295302
NCBI-ProteinID:
XP_073682611
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Position
21:complement(24956102..24962751)
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AA seq
340 aa
AA seq
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MAALMMRVGSGPFASVRVYRPALRSTAAAILRSVSVSATQSFSFPERVKIVEVGPRDGLQ
NEKSIVPTEVKIRLIDMLTEAGLPVIEATSFVSPKWVPQMADQEEVMRGLHKKPGVNYPV
LTPNLKGFQAAMKAGAKEVAIFGAASELFSKKNINCSVDESLVRFEEVMRAAKQEGVPVR
GYVSCVLGCPYEGKVSPNKVAEVAKRLYSMGCYEISLGDTIGVGTPGGMTEMLNAVKKEV
PVEALAVHCHDTYGQALANILVALQNGVRVVDSSVAGLGGCPYAQGASGNVATEDVVYML
HGLGIHTGVDLPKLLDAGSYICHSLNRRTNSKVAQASCKL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctcatgatgagggttggttcaggtcctttcgcttctgttcgggtttaccga
cccgctctgcgatctactgctgcagcaatactcagatccgtcagtgtgtctgctacacag
tcattctcattcccagagagggtgaagattgtagaggttggacctcgagatggacttcag
aatgagaagtccatcgttcccactgaggtgaagatccgtctgattgatatgctcacagaa
gcaggacttcccgtcatagaggctacaagttttgtgtcacctaaatgggtccctcagatg
gctgatcaagaggaagtgatgcgtggcctccacaagaaacctggtgtgaattaccccgtc
ctgactcctaatctgaaaggattccaggcagctatgaaggctggtgcaaaagaggtggca
atatttggtgctgcatcagaactcttcagcaagaagaacataaactgttcagtggatgag
agtcttgtgcgctttgaggaggtgatgagagcagccaaacaagagggagttcctgtgaga
ggttatgtgtcttgtgtgctgggttgtccatatgaagggaaagtatcgccaaacaaagtg
gcagaggttgctaagcgactgtattccatgggctgctatgagatttcacttggagacact
atcggagtgggcactccgggtggcatgacagaaatgttgaatgctgtgaagaaagaggtt
cctgtggaggctttagcagttcactgtcatgacacttatggacaagcactggctaacata
cttgtagcattacagaatggggtacgtgtcgtggactcatccgttgcagggctgggcggc
tgcccttatgcccaaggggcttctgggaatgttgcaactgaagatgttgtctatatgctg
catggactgggaattcacactggagtggacctgcccaaacttttggatgctggctcatat
atctgtcattcactcaacagaagaacaaactcaaaagtagctcaagcctcctgcaagctc
taa
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