Garra rufa (doctor fish): 141295309
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Entry
141295309 CDS
T11039
Symbol
smad1
Name
(RefSeq) mothers against decapentaplegic homolog 1
KO
K04676
mothers against decapentaplegic homolog 1
Organism
grf Garra rufa (doctor fish)
Pathway
grf04081
Hormone signaling
grf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
141295309 (smad1)
09133 Signaling molecules and interaction
04081 Hormone signaling
141295309 (smad1)
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Gene cluster
GFIT
Motif
Pfam:
MH2
MH1
IRF-3
Motif
Other DBs
NCBI-GeneID:
141295309
NCBI-ProteinID:
XP_073682622
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Position
21:complement(26764672..26792773)
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AA seq
472 aa
AA seq
DB search
MNVTSLFSFTSPVVRRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQ
PSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKALECCEFPFGSKQKDV
CINPYHYKRVDSPVLPPVLVPRNSEFNAKLSMLPRFRNPLHQTEPPMPQNATFPDSFQQQ
PANALPFTPNSPTNSYPSSPNSGTGSTATFPHSPSSSDPGSPFQMPETPPPAYMPPEEPM
TQDCPQPMDTNLLGQNLPLELNNQPDVQPVAYAEPKHWCSIVYYELNNRVGEAFQASSTS
VLVDGFTDPSNNRNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSI
FVQSRNCNYHHGFHPTTVCKIPSRCSLKIFNNQEFAELLAQSVNHGFEAVYELTKMCTIR
MSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcacctcgctcttctccttcaccagcccggtggtcaggagactactgggctgg
aagcaaggcgacgaagaagagaagtgggcagagaaggcggtggatgctctggtcaagaag
ctgaagaagaagaagggtgctatggaggagctggagaaggcactcagctgtcccggtcag
ccaagcaactgtgtcactatcccacgatcgctggacggaaggcttcaagtgtctcaccgg
aaaggtctgcctcacgtcatctactgccgcgtatggcgttggcctgacctgcaatcacac
catgagctcaaggccctggagtgttgtgagttcccctttggatctaagcagaaagatgtg
tgcatcaatccctaccactacaagagggtggacagtcctgtgctgccacctgtgctggtg
ccacgaaacagcgagttcaacgctaaactctctatgctgccacgcttccgtaacccactc
caccaaacagaacccccaatgcctcagaatgccaccttccctgattcctttcaacaacag
ccagcgaacgcccttcctttcacaccgaactccccgaccaacagctaccccagctcgccc
aacagcggcacaggcagtacagccaccttcccccattcaccatccagctcggacccaggc
agcccttttcagatgccagaaacccctccacctgcttatatgcccccagaggagccaatg
acacaggactgtccccagccaatggacactaacctgctaggtcagaacctgccactggag
ctcaacaaccaaccagatgttcagcctgtggcgtatgcggaacccaaacactggtgctcc
attgtgtactatgagctgaataatcgtgtgggagaggctttccaggcctcctcaaccagc
gtactggtggacggctttaccgacccctccaacaaccgtaaccgtttctgccttggtctg
ctgtcgaatgtcaaccgcaactcgaccatcgagaacactcgacgccacatcggaaaagga
gtccacttgtactatgtgggaggagaggtatacgctgaatgtttgagcgacagcagcatc
tttgtccagagccgcaactgcaactatcaccatggtttccaccccaccaccgtatgcaag
atccccagtcgctgcagcctgaagatcttcaacaaccaggagtttgctgagctcttggca
cagtccgtcaatcacggctttgaagccgtctatgaactcaccaagatgtgcaccatccgc
atgagctttgtaaagggttggggtgcagagtatcatcgacaggatgtgacaagcacccca
tgctggattgagattcatcttcacggacccctgcagtggctggataaagtcctcacccag
atgggctctcctcacaaccccatttcctccgtgtcctag
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