Garra rufa (doctor fish): 141295320
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Entry
141295320 CDS
T11039
Symbol
dnmt3ab
Name
(RefSeq) DNA (cytosine-5)-methyltransferase 3A isoform X1
KO
K17398
DNA (cytosine-5)-methyltransferase 3A [EC:
2.1.1.37
]
Organism
grf Garra rufa (doctor fish)
Pathway
grf00270
Cysteine and methionine metabolism
grf01100
Metabolic pathways
grf04148
Efferocytosis
Module
grf_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
grf00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
141295320 (dnmt3ab)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
141295320 (dnmt3ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
grf03000
]
141295320 (dnmt3ab)
03032 DNA replication proteins [BR:
grf03032
]
141295320 (dnmt3ab)
03036 Chromosome and associated proteins [BR:
grf03036
]
141295320 (dnmt3ab)
Enzymes [BR:
grf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
141295320 (dnmt3ab)
Transcription factors [BR:
grf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
141295320 (dnmt3ab)
DNA replication proteins [BR:
grf03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
141295320 (dnmt3ab)
Chromosome and associated proteins [BR:
grf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
141295320 (dnmt3ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNM3A_N
ADD_DNMT3
DNMT3_ADD_GATA1-like
DNA_methylase
PWWP
GIDE
Med13_C
Motif
Other DBs
NCBI-GeneID:
141295320
NCBI-ProteinID:
XP_073682629
LinkDB
All DBs
Position
21:33546131..33657177
Genome browser
AA seq
990 aa
AA seq
DB search
MPSNAVTAAAAAFKSSDFNCDTNGNQMNESSRMDTVIIDEMPSLCTPVRKVGRPGRKRKH
LRVECHRPVDKLVGVAKQHKGVELQSSLQSQNGDVERHENKSCEGRHPTLDKNAAENGLP
SQSGCRAGSASDSSLSPSLENGFVSSQDSEKYDEETLPTLPRKKRGRRKLERPTKYVEHK
EDEGGDSGKNEGARGRLRGGVGWEVSLRQRPMPRVTFQAGDPYYISKRTREELLAKWKLE
AEKKAKLVSVMNSMEDHGEVESEPQKDSLITVPLLFPPPMPPTQQQPPQPQPQTNLKPQP
SPQQQPPPFQQQPQQQPTDPASPTVATTPEPVLIGDGDKTSPKSSDTESEYEDGRGFGIG
ELVWGKLRGFSWWPGRIVSWLMTRRSRAAEGTRWVMWFGDCKFSVVCVEKLLPLSSFHNA
FHQPTYNKQPMYKKAIFEVLKVASTRAGKNFLTCLESDDTDPSKSVDMENKQMIEWAMTG
FQPTGPKGLEPPEEERNPYKEVYPEMWVEPEAAAYTPPPAKKPRKSTATEKPKVKDIIDE
RTRERLVYEVRQKCRNIEDICISCGSLNVSLEHPLFIGGMCQSCKNCFLECAYQYDDDGY
QSYCTICCGGREVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGAKGQYG
LLERRADWPCRLQHFFANNHDQDFEPPKLYPPVLAENRKPIRVLSLFDGIATGLLVLKEL
GIQVERYVASEVCEDSITVGIVRHQGRIMYVHDVRNITRKNIQEWGPFDLVIGGSPCNDL
SIVNPARKGLYEGTGRLFFEFYRLLHEARPKEGDHRPFFWLFENVVAMGVSDKRDISRFL
ECNPVMIDAKEVSAAHRARYFWGNLPGMNRPLSAMCTDKLDLQDCLEHGRTAKFDKVRTI
TTRSNSIKQGKDQHFPVFMNDKEDILWCTEMESRGTSRAIVGEEVFGFPDHYTDVSNMSR
LARQRLLGRSWSVPVIRHLFAPLKEYFACV
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccaacgcagtcaccgccgccgccgccgcatttaagagctccgacttcaactgt
gacacgaacggaaatcaaatgaatgagagctctagaatggacaccgtgattattgatgag
atgccttcgctctgcactcctgtccgcaaggttggacggcctggccgcaaacgcaagcac
ctccgcgtggagtgtcacaggccagtggacaagctggtgggcgtggctaagcagcacaaa
ggggtggagctccagtcatctttgcagtctcagaatggagacgttgagaggcatgagaac
aaatcgtgtgaaggtcgccaccccacgctggacaagaatgctgcggaaaacgggctccca
agccagtcgggctgccgggccgggtcggcctctgattcaagcctgagcccatccctggag
aacggatttgtctccagccaggactcagagaagtacgacgaggagacgctgccaactctg
cctcgcaagaaacgggggagacggaaactggagcggccgactaaatacgtggagcacaag
gaggacgagggtggagactctggaaagaatgagggagctcgagggaggctccgtggggga
gtgggctgggaagtcagcctccgtcaaagacccatgcccagagtaactttccaggccggt
gacccttattacattagcaagaggaccagggaggaattgctggccaagtggaagttggag
gcagagaagaaggcgaaactggtgtctgtgatgaactcaatggaggaccatggcgaggta
gagtcggagccgcaaaaagactccttaatcaccgtcccactactctttcctccaccaatg
ccgccaacgcagcagcaaccgccacagcctcagcctcagaccaacctcaaaccccagcct
tctccccagcaacaacctccaccattccaacagcaaccgcagcagcagcctacggatcca
gcctctccaactgttgccaccaccccagagcccgtgcttataggggacggagacaagacc
tcacccaagtcctctgacacagagtctgagtacgaggatggccgaggtttcggcatcggt
gagcttgtgtggggaaagttacgaggattctcctggtggcccggccggattgtatcctgg
ttaatgactagacgcagccgggcagctgagggcactagatgggtcatgtggttcggagac
tgcaagttttctgtggtctgtgttgaaaaactgttgcctttaagttccttccacaacgcc
ttccaccagccaacctacaataaacaaccaatgtacaagaaagccatctttgaggtgcta
aaggtagccagcactagagcaggcaaaaacttcctcacatgcctggagagtgacgacact
gacccttctaagtcagtagacatggaaaacaaacagatgattgaatgggccatgacggga
tttcaacccacaggacctaaaggtctagaaccgcctgaagaagagcgtaacccctacaag
gaagtgtacccagagatgtgggtggagccagaggcggcggcctacacgcccccaccagca
aaaaagccccgcaagagcacagccacagagaaacccaaggtcaaagacatcatcgacgag
cggactcgagagaggcttgtatacgaagttcgtcaaaaatgtagaaacattgaagacatc
tgcatctcctgtggcagccttaatgtttccctggagcacccactcttcattggaggaatg
tgccaaagctgtaagaactgcttcctagaatgtgcttatcaatatgatgacgatggctac
cagtcctattgtactatctgctgtggagggagggaagtgctcatgtgtggaaacaataac
tgttgcaggtgtttctgtgtggagtgtgtggatctgttggtggggcccggcgcggcacag
gcagctattaaggaagacccgtggaactgctatatgtgtggggcgaagggtcagtacggc
ctgctggagcgccgagcagattggccttgcagactacagcacttctttgccaacaatcac
gaccaggactttgaaccaccaaagctctaccctccggttttggcagagaacagaaaaccc
attcgcgtcctgtcactttttgatgggatcgcaacagggctgctggttctgaaggagctg
ggcatccaagtagagcgttacgtggcctcagaagtgtgtgaagactccatcactgtgggc
atcgttcggcaccagggacgcataatgtatgtgcatgacgtgagaaacatcacccgtaaa
aatatccaggaatggggtccttttgatcttgtcatcggtggaagcccatgcaatgacttg
tccatagtgaatccagcaagaaaaggtctctacgagggcacgggtcgactcttctttgag
ttttaccggctgttacatgaggcccgccctaaagaaggagatcacaggccgttcttctgg
ctctttgagaatgtggtggccatgggtgtcagcgacaagagggacatctctcgcttttta
gagtgcaacccagtgatgatcgatgccaaggaggtgtctgctgcccacagagctcgctat
ttttggggtaacctgcctggcatgaacagaccattgagcgccatgtgcactgataaactg
gaccttcaagactgtttggagcatggcaggacagctaagtttgataaagtgcggaccatc
accactcggtctaattccataaagcagggcaaagaccagcacttcccggtcttcatgaat
gacaaagaggacatcctgtggtgcactgagatggagagcagaggaacctcgagggccatc
gtcggtgaagaggtgttcggcttccctgaccattacacagacgtgtcgaacatgagtcgt
ctggccaggcagaggctgctgggaaggtcgtggagcgtcccggtcatccgtcacttgttt
gcaccactcaaagagtacttcgcctgcgtctga
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